Skip Header

Contribute Send feedback
Read comments (?) or add your own

B3Q2A1 (B3Q2A1_RHIE6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Pectate lyase secreted protein EMBL ACE93807.1
Gene names
Name:hrpW EMBL ACE93807.1
Ordered Locus Names:RHECIAT_PB0000094
Encoded onPlasmid pB EMBL ACE93807.1
OrganismRhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP]
Taxonomic identifier491916 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length304 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACE93807.1
   Technical termComplete proteome
Plasmid EMBL ACE93807.1
Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3Q2A1 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 43B6FBB8864A8C6A

FASTA30432,492
        10         20         30         40         50         60 
MCGVDGQRPI DFDRTSRFDL ESDCLGGSNR ADTDFTAIRT RKVSPFEDFS GNPPTLTSYV 

        70         80         90        100        110        120 
PKSRETSENG MDSDPKDLLR KHINWQSDSK KVDPSDEKQA TTLQTTTEKP DLSKEGSVIV 

       130        140        150        160        170        180 
VNEPIVVDGG VFDGKGATYT ASSKLGDGGQ SETQSPLFIL KNGATLKNVN LGENGADGIH 

       190        200        210        220        230        240 
VYGGATLENV NWQNVGENAL TVKSAGDVTI VGGSAKGATD KIFQINADTR FYLKDFVADG 

       250        260        270        280        290        300 
FTTLVRTNGG KQIDADVTID GGAFSHGSNV FRTDSSLASV TFLSDITLDD VKNWTRVGDN 


QSGV

« Hide

References

[1]"Genome diversity and DNA divergence of Rhizobium etli."
Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001076 Genomic DNA. Translation: ACE93807.1.
RefSeqYP_001984357.1. NC_010996.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB3Q2A1.

Protein family/group databases

CAZyPL3. Polysaccharide Lyase Family 3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6402598.
GenomeReviewsGene locus RHECIAT_PB0000094 in contig CP001076_GR.
KEGGrec:RHECIAT_PB0000094.
PATRIC23102531. VBIRhiEtl120572_4476.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG653783.
OMAETSENGM.
ProtClustDBCLSK2312601.

Family and domain databases

InterProIPR004898. Pectate_lyase_cat.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF03211. Pectate_lyase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3Q2A1_RHIE6
AccessionPrimary (citable) accession number: B3Q2A1
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info