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B3Q0M4 (B3Q0M4_RHIE6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Triosephosphate isomerase 1 HAMAP MF_00147
Short name=TIM 1 HAMAP MF_00147
EC=5.3.1.1 HAMAP MF_00147
Alternative name(s):
Triose-phosphate isomerase 1 HAMAP MF_00147
Gene names
Name:tpiAch EMBL ACE91228.1
Synonyms:tpiA1 HAMAP MF_00147
Ordered Locus Names:RHECIAT_CH0002273
OrganismRhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP]
Taxonomic identifier491916 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-glyceraldehyde 3-phosphate = glycerone phosphate. HAMAP MF_00147 RuleBase RU000517

Pathway

Carbohydrate biosynthesis; gluconeogenesis. HAMAP MF_00147 RuleBase RU003527

Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1. HAMAP MF_00147 RuleBase RU003527

Subunit structure

Homodimer By similarity. HAMAP MF_00147

Subcellular location

Cytoplasm By similarity HAMAP MF_00147.

Sequence similarities

Belongs to the triosephosphate isomerase family. RuleBase RU004162 HAMAP MF_00147

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site991Electrophile By similarity HAMAP MF_00147
Active site1691Proton acceptor By similarity HAMAP MF_00147
Binding site121Substrate By similarity HAMAP MF_00147
Binding site141Substrate By similarity HAMAP MF_00147

Sequences

Sequence LengthMass (Da)Tools
B3Q0M4 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: DEE631E258C0734E

FASTA25626,789
        10         20         30         40         50         60 
MTPDVRPLVA GNWKMNGTRA SLDQIKAIAE GVRPPLADKV EALICPPATL LYVATALCTD 

        70         80         90        100        110        120 
SPLSIGAQDC HQKASGAHTG DISAEMIADS FGTYVIVGHS ERRTDHAETD HLVRAKAEAA 

       130        140        150        160        170        180 
FAAGLTAIIC IGETADERRA GQALDIIKRQ LSASVPDGAT AENTVIAYEP IWAIGTGVTP 

       190        200        210        220        230        240 
TSGDVEKAHA FMRAEMAARF GEEGRKMRLL YGGSVKPANA GELMGIANVD GALIGGASLK 

       250 
AADFLAIYRA YEALLA

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References

[1]"Genome diversity and DNA divergence of Rhizobium etli."
Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001074 Genomic DNA. Translation: ACE91228.1.
RefSeqYP_001978406.1. NC_010994.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB3Q0M4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6400360.
GenomeReviewsGene locus RHECIAT_CH0002273 in contig CP001074_GR.
KEGGrec:RHECIAT_CH0002273.
PATRIC23098026. VBIRhiEtl120572_2248.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG708281.
OMARAYHRES.
ProtClustDBPRK00042.

Family and domain databases

HAMAPMF_00147_B. TIM_B.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01803.
PANTHERPTHR21139. Triophos_ismrse. 1 hit.
PfamPF00121. TIM. 1 hit.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 1 hit.
TIGRFAMsTIGR00419. Tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3Q0M4_RHIE6
AccessionPrimary (citable) accession number: B3Q0M4
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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