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B3Q001

- GLGA_RHIE6

UniProt

B3Q001 - GLGA_RHIE6

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Protein

Glycogen synthase

Gene

glgA

Organism
Rhizobium etli (strain CIAT 652)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-3668-MONOMER.
RETL491916:GH4T-3863-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:RHECIAT_CH0003864
OrganismiRhizobium etli (strain CIAT 652)
Taxonomic identifieri491916 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000008817: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 480480Glycogen synthasePRO_1000126092Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi491916.RHECIAT_CH0003864.

Structurei

3D structure databases

ProteinModelPortaliB3Q001.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPYHDESQ.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B3Q001-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKVLSVSSEV FPLIKTGGLA DVSGALPIAL KAFGVETKTL LPGYPAVMKV
60 70 80 90 100
IRDPVVRLEF ADLLGEKATV LEVEHEGLDL LVLHAPAYYD RPGGPYLDPL
110 120 130 140 150
GKDYPDNWRR FAALSLAAAE IAAGLLPGWQ PDLVHTHDWQ AALTSVYMRY
160 170 180 190 200
YPTPELPSVL TIHNIAFQGQ FGSEIFPGLR LPGHAFAIDG VEYYGTTGFL
210 220 230 240 250
KGGLQTAHAI TTVSPTYADE ILTPEFGMGL EGVIATRIDN LHGIVNGIDT
260 270 280 290 300
DIWNPATDPV VHTHYGPTTL KNRDENRRSI AEFFHLDNDD APIFCVISRL
310 320 330 340 350
TWQKGMDLVA NVADEIVAMG GKLVVLGSGE AALEGALLAS ASRHPGRIGV
360 370 380 390 400
SIGYNEPMSH LMQAGCDAII IPSRFEPCGL TQLYGLRYGC VPIVARTGGL
410 420 430 440 450
NDTVIDANHA ALAAKVATGI QFSPVTETGL LQAIRRAMHF YADRKLWTQL
460 470 480
QKQGMKSDVS WEKSAERYAA LYSSLVSKGM
Length:480
Mass (Da):51,950
Last modified:September 2, 2008 - v1
Checksum:i103BAC1E80D6BE35
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001074 Genomic DNA. Translation: ACE92801.1.
RefSeqiWP_012485228.1. NC_010994.1.
YP_001979979.1. NC_010994.1.

Genome annotation databases

EnsemblBacteriaiACE92801; ACE92801; RHECIAT_CH0003864.
GeneIDi6401951.
KEGGirec:RHECIAT_CH0003864.
PATRICi23101170. VBIRhiEtl120572_3806.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001074 Genomic DNA. Translation: ACE92801.1 .
RefSeqi WP_012485228.1. NC_010994.1.
YP_001979979.1. NC_010994.1.

3D structure databases

ProteinModelPortali B3Q001.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 491916.RHECIAT_CH0003864.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACE92801 ; ACE92801 ; RHECIAT_CH0003864 .
GeneIDi 6401951.
KEGGi rec:RHECIAT_CH0003864.
PATRICi 23101170. VBIRhiEtl120572_3806.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294941.
KOi K00703.
OMAi PYHDESQ.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci RETL1328306-WGS:GSTH-3668-MONOMER.
RETL491916:GH4T-3863-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome diversity and DNA divergence of Rhizobium etli."
    Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CIAT 652.

Entry informationi

Entry nameiGLGA_RHIE6
AccessioniPrimary (citable) accession number: B3Q001
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 2, 2008
Last modified: October 1, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3