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B3Q001

- GLGA_RHIE6

UniProt

B3Q001 - GLGA_RHIE6

Protein

Glycogen synthase

Gene

glgA

Organism
Rhizobium etli (strain CIAT 652)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (02 Sep 2008)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei15 – 151ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-3668-MONOMER.
    RETL491916:GH4T-3863-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiGT5. Glycosyltransferase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthaseUniRule annotation
    Gene namesi
    Name:glgAUniRule annotation
    Ordered Locus Names:RHECIAT_CH0003864
    OrganismiRhizobium etli (strain CIAT 652)
    Taxonomic identifieri491916 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
    ProteomesiUP000008817: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 480480Glycogen synthasePRO_1000126092Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi491916.RHECIAT_CH0003864.

    Structurei

    3D structure databases

    ProteinModelPortaliB3Q001.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294941.
    KOiK00703.
    OMAiPYHDESQ.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B3Q001-1 [UniParc]FASTAAdd to Basket

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    MKVLSVSSEV FPLIKTGGLA DVSGALPIAL KAFGVETKTL LPGYPAVMKV    50
    IRDPVVRLEF ADLLGEKATV LEVEHEGLDL LVLHAPAYYD RPGGPYLDPL 100
    GKDYPDNWRR FAALSLAAAE IAAGLLPGWQ PDLVHTHDWQ AALTSVYMRY 150
    YPTPELPSVL TIHNIAFQGQ FGSEIFPGLR LPGHAFAIDG VEYYGTTGFL 200
    KGGLQTAHAI TTVSPTYADE ILTPEFGMGL EGVIATRIDN LHGIVNGIDT 250
    DIWNPATDPV VHTHYGPTTL KNRDENRRSI AEFFHLDNDD APIFCVISRL 300
    TWQKGMDLVA NVADEIVAMG GKLVVLGSGE AALEGALLAS ASRHPGRIGV 350
    SIGYNEPMSH LMQAGCDAII IPSRFEPCGL TQLYGLRYGC VPIVARTGGL 400
    NDTVIDANHA ALAAKVATGI QFSPVTETGL LQAIRRAMHF YADRKLWTQL 450
    QKQGMKSDVS WEKSAERYAA LYSSLVSKGM 480
    Length:480
    Mass (Da):51,950
    Last modified:September 2, 2008 - v1
    Checksum:i103BAC1E80D6BE35
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001074 Genomic DNA. Translation: ACE92801.1.
    RefSeqiWP_012485228.1. NC_010994.1.
    YP_001979979.1. NC_010994.1.

    Genome annotation databases

    EnsemblBacteriaiACE92801; ACE92801; RHECIAT_CH0003864.
    GeneIDi6401951.
    KEGGirec:RHECIAT_CH0003864.
    PATRICi23101170. VBIRhiEtl120572_3806.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001074 Genomic DNA. Translation: ACE92801.1 .
    RefSeqi WP_012485228.1. NC_010994.1.
    YP_001979979.1. NC_010994.1.

    3D structure databases

    ProteinModelPortali B3Q001.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 491916.RHECIAT_CH0003864.

    Protein family/group databases

    CAZyi GT5. Glycosyltransferase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACE92801 ; ACE92801 ; RHECIAT_CH0003864 .
    GeneIDi 6401951.
    KEGGi rec:RHECIAT_CH0003864.
    PATRICi 23101170. VBIRhiEtl120572_3806.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294941.
    KOi K00703.
    OMAi PYHDESQ.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci RETL1328306-WGS:GSTH-3668-MONOMER.
    RETL491916:GH4T-3863-MONOMER.

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome diversity and DNA divergence of Rhizobium etli."
      Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
      Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CIAT 652.

    Entry informationi

    Entry nameiGLGA_RHIE6
    AccessioniPrimary (citable) accession number: B3Q001
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3