B3PXM7 (B3PXM7_RHIE6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase protein EMBL ACE89233.1
EC=4.1.2.4 EMBL ACE89233.1

Gene names

Name:	deoC EMBL ACE89233.1
Ordered Locus Names:	RHECIAT_CH0000238

Organism

Rhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP]

Taxonomic identifier

491916 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	258 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343

Ontologies

Keywords
Ligand	Schiff base SAAS SAAS011343
Molecular function	Lyase SAAS SAAS011343 EMBL ACE89233.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3PXM7 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 14C240A716E73DC4	FASTA	258	27,005
	10 20 30 40 50 60 MNSHSIRETA AVALSLLDLT NLKDDCTEAQ IEALCARAQT PYGNSAAICI WPRFVAQARN 70 80 90 100 110 120 ILGTGHAVRI ATVVNFPAGE MEVADVAAET REAIADGADE IDLVIPYRKF IAGDEKAVTD 130 140 150 160 170 180 MVRAVRAECT GPVLLKVIIE TGELKEAALI RRASELAIEA GADFIKTSTG KVAVNATLEA 190 200 210 220 230 240 ADIMIRAIRE SGRKVGFKPA GGIGSVADAA LYLSLAETIM APDWAMPSTF RFGASGLLDD 250 ILAVLSGAQP ASAAASGY

References

[1]

"Genome diversity and DNA divergence of Rhizobium etli." Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001074 Genomic DNA. Translation: ACE89233.1.
RefSeq	YP_001976411.1. NC_010994.1.
3D structure databases
ProteinModelPortal	B3PXM7.
ModBase	Search...
Protein-protein interaction databases
STRING	B3PXM7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6398112.
GenomeReviews	Gene locus RHECIAT_CH0000238 in contig CP001074_GR.
KEGG	rec:RHECIAT_CH0000238.
PATRIC	23093936. VBIRhiEtl120572_0236.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG636421.
OMA	ELVQQCK.
ProtClustDB	PRK05283.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/AroFGH_arch. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01619.
PANTHER	PTHR10889. DeoC. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. DeoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3PXM7_RHIE6

Accession

Primary (citable) accession number: B3PXM7

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)