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B3PTL6 (B3PTL6_RHIE6) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodB EMBL ACE90276.1
Ordered Locus Names:RHECIAT_CH0001295 EMBL ACE90276.1
OrganismRhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP] EMBL ACE90276.1
Taxonomic identifier491916 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length200 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family.

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414 EMBL ACE90276.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3PTL6 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 958A50A323BF68BB

FASTA20022,477
        10         20         30         40         50         60 
MAFELPELPY DYEALAPFMS KETLEFHHDK HHKAYVDNGN KLAAEAGLSD LSLEEVVKKS 

        70         80         90        100        110        120 
FGTNAGLFNN AAQHYNHIHF WKWMKKGGGG NKLPGKLEAA FASDLGGYDK FKADFANAGA 

       130        140        150        160        170        180 
TQFGSGWAWV SVKNGKLEIS KTPNGENPLV HGATPILGVD VWEHSYYIDY RNARPKYLEA 

       190        200 
FIDSLINWDY VLERYEEATK 

« Hide

References

[1]"Genome diversity and DNA divergence of Rhizobium etli."
Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CIAT 652 EMBL ACE90276.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001074 Genomic DNA. Translation: ACE90276.1.
RefSeqYP_001977454.1. NC_010994.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING491916.RHECIAT_CH0001295.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACE90276; ACE90276; RHECIAT_CH0001295.
GeneID6399382.
KEGGrec:RHECIAT_CH0001295.
PATRIC23096022. VBIRhiEtl120572_1268.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013584.
KOK04564.
OMADYVLERY.
OrthoDBEOG63NMNT.
ProtClustDBCLSK864796.

Enzyme and pathway databases

BioCycRETL491916:GH4T-1294-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3PTL6_RHIE6
AccessionPrimary (citable) accession number: B3PTL6
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: November 13, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)