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Protein
Submitted name:

Probable DNA ligase (ATP) protein

Gene

RHECIAT_CH0001250

Organism
Rhizobium etli (strain CIAT 652)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciRETL491916:G1GBZ-1239-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Probable DNA ligase (ATP) proteinImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RHECIAT_CH0001250Imported
OrganismiRhizobium etli (strain CIAT 652)Imported
Taxonomic identifieri491916 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000008817 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi491916.RHECIAT_CH0001250

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini306 – 436DNA_LIGASE_A3InterPro annotationAdd BLAST131

Phylogenomic databases

eggNOGiENOG4107QIM Bacteria
COG1793 LUCA
HOGENOMiHOG000036007
KOiK10747
OMAiWLFEESY
OrthoDBiPOG091H09SJ

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

B3PTH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFADLLDR LVLTPSRNGK LKLLTDYFRD TPDPDRGYGL AAIAGTLEVR
60 70 80 90 100
NVKPAMLREL VLERMDEVLF RYSYDYVGDL AETISLVWDN ERDIDRSALA
110 120 130 140 150
QPRLGEVVSR MNGLGRTEVR GYVRDLLDRL DSSGRFAFIK LATGAMRIGV
160 170 180 190 200
SARLAKQALA DLGGKDVTEI ETLWHGLQPP YEALFQWLTG GGDKPALATP
210 220 230 240 250
AIFHSVMLAN AVEEGDLTGL EPGDYAAEWK WDGIRVQLSR SGDRRKIYSR
260 270 280 290 300
SGDDISGAFP DILDAINFSG VVDGELLVGG TARSNSPTRT FSDLQQRLNR
310 320 330 340 350
KTVTARMLDD YPAFIRAYDL LFDDEEDVRG RTYVDRRERL SEIIDRAPHD
360 370 380 390 400
RFDLSPLVPF SSWEELDALR AAPPDPVIEG VMIKRRDSIY QAGRMKGPWF
410 420 430 440 450
KWKRNPYNVD AVLMYAQRGH GKRSSYYSDF TFGVWADDED GEQLVPVGKA
460 470 480 490 500
YFGFTDAELD LLDKFVRNNT TERFGPVRAV RADRDFGFVV EVAFEGINRS
510 520 530 540
TRHKSGVAMR FPRIARLRPD KPPYEADRLR TLIAMIDAKP G
Length:541
Mass (Da):61,068
Last modified:September 2, 2008 - v1
Checksum:i5DCB1F3F2EF6F01E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001074 Genomic DNA Translation: ACE90231.1
RefSeqiWP_012483101.1, NC_010994.1

Genome annotation databases

EnsemblBacteriaiACE90231; ACE90231; RHECIAT_CH0001250
KEGGirec:RHECIAT_CH0001250

Similar proteinsi

Entry informationi

Entry nameiB3PTH1_RHIE6
AccessioniPrimary (citable) accession number: B3PTH1
Entry historyiIntegrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: April 25, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported