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B3PTH1 (B3PTH1_RHIE6) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL ACE90231.1
Gene names
Ordered Locus Names:RHECIAT_CH0001250 EMBL ACE90231.1
OrganismRhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP] EMBL ACE90231.1
Taxonomic identifier491916 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length541 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B3PTH1 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 5DCB1F3F2EF6F01E

FASTA54161,068
        10         20         30         40         50         60 
MKAFADLLDR LVLTPSRNGK LKLLTDYFRD TPDPDRGYGL AAIAGTLEVR NVKPAMLREL 

        70         80         90        100        110        120 
VLERMDEVLF RYSYDYVGDL AETISLVWDN ERDIDRSALA QPRLGEVVSR MNGLGRTEVR 

       130        140        150        160        170        180 
GYVRDLLDRL DSSGRFAFIK LATGAMRIGV SARLAKQALA DLGGKDVTEI ETLWHGLQPP 

       190        200        210        220        230        240 
YEALFQWLTG GGDKPALATP AIFHSVMLAN AVEEGDLTGL EPGDYAAEWK WDGIRVQLSR 

       250        260        270        280        290        300 
SGDRRKIYSR SGDDISGAFP DILDAINFSG VVDGELLVGG TARSNSPTRT FSDLQQRLNR 

       310        320        330        340        350        360 
KTVTARMLDD YPAFIRAYDL LFDDEEDVRG RTYVDRRERL SEIIDRAPHD RFDLSPLVPF 

       370        380        390        400        410        420 
SSWEELDALR AAPPDPVIEG VMIKRRDSIY QAGRMKGPWF KWKRNPYNVD AVLMYAQRGH 

       430        440        450        460        470        480 
GKRSSYYSDF TFGVWADDED GEQLVPVGKA YFGFTDAELD LLDKFVRNNT TERFGPVRAV 

       490        500        510        520        530        540 
RADRDFGFVV EVAFEGINRS TRHKSGVAMR FPRIARLRPD KPPYEADRLR TLIAMIDAKP 


G 

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References

[1]"Genome diversity and DNA divergence of Rhizobium etli."
Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CIAT 652 EMBL ACE90231.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001074 Genomic DNA. Translation: ACE90231.1.
RefSeqYP_001977409.1. NC_010994.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING491916.RHECIAT_CH0001250.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACE90231; ACE90231; RHECIAT_CH0001250.
GeneID6399337.
KEGGrec:RHECIAT_CH0001250.
PATRIC23095922. VBIRhiEtl120572_1218.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMARVWLWSR.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycRETL491916:GH4T-1249-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3PTH1_RHIE6
AccessionPrimary (citable) accession number: B3PTH1
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)