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B3PT03 (B3PT03_RHIE6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788
Gene names
Ordered Locus Names:RHECIAT_CH0001188
OrganismRhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP]
Taxonomic identifier491916 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length154 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788

Sequence similarities

Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Sequences

Sequence LengthMass (Da)Tools
B3PT03 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: F8D21F07254F25F1

FASTA15416,478
        10         20         30         40         50         60 
MANRLQRGSA AAAMAVALVG SFEGLRQNAY PDPATGGQPW TICYGSTNGV KPGDRRTVEQ 

        70         80         90        100        110        120 
CKALLALELQ TYARGIESCV RVPLPDARFV ALTSFAYNVG VKAACGSSAV RLINQGRTAE 

       130        140        150 
GCEALLKWNR AAGITFPGLT RRRQKERAFC LEGV

« Hide

References

[1]"Genome diversity and DNA divergence of Rhizobium etli."
Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001074 Genomic DNA. Translation: ACE90169.1.
RefSeqYP_001977347.1. NC_010994.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB3PT03.

Protein family/group databases

CAZyGH24. Glycoside Hydrolase Family 24.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6399275.
GenomeReviewsGene locus RHECIAT_CH0001188 in contig CP001074_GR.
KEGGrec:RHECIAT_CH0001188.
PATRIC23095804. VBIRhiEtl120572_1159.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG756417.
OMACEALLKW.
ProtClustDBCLSK771129.

Family and domain databases

InterProIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
IPR023347. Lysozyme_dom.
[Graphical view]
Gene3DG3DSA:1.10.530.40. G3DSA:1.10.530.40. 1 hit.
KOK01185.
PfamPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3PT03_RHIE6
AccessionPrimary (citable) accession number: B3PT03
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info