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B3PR58 (B3PR58_RHIE6) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ndvB EMBL ACE93212.1
Ordered Locus Names:RHECIAT_CH0004284
OrganismRhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP]
Taxonomic identifier491916 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length2839 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane EMBL ACE93212.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

catalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3PR58 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 4D6CBF11ACD1E0AD

FASTA2,839316,622
        10         20         30         40         50         60 
MSIANLSPSL SREPEMKQID HNDSIRSTYL SIEDIKAMGD AVARNGVSKL PAFAAFDFFA 

        70         80         90        100        110        120 
RHKENEKEIL RVYRTTATDV EAGETITPAA EWLLDNHYIV EEAIQEVRRD FPRRFYRELP 

       130        140        150        160        170        180 
TMSVGGVEIP RTLVLAWLYV AHTHSTISQE SLTALVDGFQ ANETLRIGEL WALPSLVRYV 

       190        200        210        220        230        240 
LVENLRRISS RVEASRRLRR RANEAADELV RLTDPAKAAA YLKTLEPLAE DNTFSTQFLY 

       250        260        270        280        290        300 
RLRDGSQTSS LAITWLDERL EELGRNTEEA TTAEHSRLSS GNVTMGNIIR SLREIDDTEW 

       310        320        330        340        350        360 
SVWVEQVSHV DKLLWEHSDY GILDSGSRNK YRKQIEKLAK RSPLTEMEIA QLALDMTDAA 

       370        380        390        400        410        420 
KASGEPQPHE PNVGGFLSGA QRPKLEARAN YRPTITQHFV RAVRQFNWLA IAVPVMLLTV 

       430        440        450        460        470        480 
IAMAVVGKFM ASAGMGALEI AVLLIMFSLP ASEGATGLFN TLLSFFVTPA RLVGYEFKEG 

       490        500        510        520        530        540 
IPEDARTLLV VPCLISNRDS VDDHVRNLEV HYLANPRGEI YFALLSDWPD SDVEETAADL 

       550        560        570        580        590        600 
EVLDYARREI ANLSARYAYD GKTRFYLLHR RRLYNASEGV WMGWERKRGK LHELNMLLRG 

       610        620        630        640        650        660 
DRDTTYLPGA NAVPANVQYV MTLDADTRLM RDAVTKLVGK LYHPINRPVI NPKTGRVESG 

       670        680        690        700        710        720 
YGVLQPRVTP SLTTGKDASV FQRVFSINRG LDPYVFTVSD VYQDLAGEGT FTGKGLYHVD 

       730        740        750        760        770        780 
AFEASLKGRI EENSVLSHDL LEGSMARCAL VTDLELVEDF PIRYEVETSR QHRWARGDWQ 

       790        800        810        820        830        840 
LLPYMFNPKY GVTALGRWKM FDNLRRSLTP IAWFFASVLG WYFMGPLGAL VWQILLIFCL 

       850        860        870        880        890        900 
FVAPTLSLIN GIIPRTSDIV ARAHLYTVWS DITAANAQVA LRIVFIADSA CMMADAIGRS 

       910        920        930        940        950        960 
LYRLFVSRKL MLQWRTAASV QAGGQGTLAS YYKQMWHAPV LALLALGFAA LPGDNAFLVG 

       970        980        990       1000       1010       1020 
IPFALLWILS PVVAWYVSQS AETEDRLEVA DSVSSELRKI ARRTWRYFET FTTPEQNYLP 

      1030       1040       1050       1060       1070       1080 
PDNIQETPHV IVAARTSPTN IGVYLLSVVS GRHFGWFSFE ETLERLEQTI ATIDKMEKFR 

      1090       1100       1110       1120       1130       1140 
GHLFNWYHTD TLQTLGPRYV SAVDSGNLAG HLIAISSACR NWAEAPSAHM QGNLDGVGDT 

      1150       1160       1170       1180       1190       1200 
AGILGEVLAD LPDDRKTVRP LRRRLEERIV GFQNALAAVK REHEFASIRI INLAVLARDI 

      1210       1220       1230       1240       1250       1260 
EKLAANLDHE VKSKQSEEVT QWAASLVKVC EAHISDSTFD LSKVDALRPR LVALRDKARD 

      1270       1280       1290       1300       1310       1320 
LAFSMDFGFL FRPERRLLSI GYRVESGELD QACYDLLASE CRLTSLFGIA KGDLPTEHWY 

      1330       1340       1350       1360       1370       1380 
RLGRQVVPVG SRGALVSWSG SMFEYLMPPL VMQERGGGIL NQTNNLVVVE QMNYARKLGI 

      1390       1400       1410       1420       1430       1440 
PWGISEAAFN ARDHNLNYQY TNFGVPTLGL KRGLGHNAVI APYASLLASQ YDPPGALENL 

      1450       1460       1470       1480       1490       1500 
QRLRKVGALG KFGFHDAVDF TPTRVPEGKK CAVVYNYYAH HHGMSIAAVA NVAFNGHLRE 

      1510       1520       1530       1540       1550       1560 
LFHSDPVIEA AELLLQEKAP RDIPVMSGKH ESDTPASIQD DLLRPEIRKI SDPASRDREL 

      1570       1580       1590       1600       1610       1620 
VFLSNGHYSL MLTATGAGYS RWNGLSVSRW KADPTEDRWG TFIFLRDTAT NEWWSATAEP 

      1630       1640       1650       1660       1670       1680 
KGVEGEKIKV EFADEKAQFT KTIGDLTSEV ECIIATEHDA EARRVTLLNM GTEDRFIEVT 

      1690       1700       1710       1720       1730       1740 
SYLEPVITSD DTDNAHPAFA RMFIKTEIGK RGDVIRAERN KRDPNEPNIS IAHLIVDNAG 

      1750       1760       1770       1780       1790       1800 
DTRHTEFETD RRKFIGRGRS LADAAAFDPG ATLSGSDGFM LDPVMSLRRT VRVPAGKKVS 

      1810       1820       1830       1840       1850       1860 
VFFWTIAAPN RDEVDKAVNR YRHPDAFNHE LVQAWTRTQV QMRHVGVTSQ QAAAFQHLGR 

      1870       1880       1890       1900       1910       1920 
YLVYPDMQLR KDEATVEAGL QSQSALWPLA ISGDFPIFTL RVNDDMDLDI AREALLAQEY 

      1930       1940       1950       1960       1970       1980 
LRSRGVTADL IIMNERASSY AQDMQHALDA MCENVRRMGQ ADGLRQHIFA VRKDLMEEST 

      1990       2000       2010       2020       2030       2040 
YHAVIAASRV TLHAKNGKVI DQINRAVALF APSKDELQEM ERAERNKVPV KRVAPVPPPV 

      2050       2060       2070       2080       2090       2100 
VPAVVIEEEG DLDFWNGIGG FARDGREYVV RLPGGHATPQ PWINVISNDR FGFHVSAEGA 

      2110       2120       2130       2140       2150       2160 
GFTWSVNSRD YQLTSWSNDA VVNRSGEAFY LADLDSGAVM TPFAALSRRP DVRFEARHGL 

      2170       2180       2190       2200       2210       2220 
GYSVFSSIQH DIALELTQTI ARDKPVKLQR LRLRNTGSTG RRLRLYGYVE WVLGNNPGRT 

      2230       2240       2250       2260       2270       2280 
APFILSRHDG ETGALFATNP YSIDFSNRTA FFAASETPSS VCASRREFIG KAGTIQAPQA 

      2290       2300       2310       2320       2330       2340 
VTSAAALSGA TELDGDPAAA LAIDIELGAG EERDFTFFLG DTPTEEEART VIADVRKASF 

      2350       2360       2370       2380       2390       2400 
DDAVEANRSF WRDFTGRLQI STPDRGMNNL VNTWLPYQSL GCRIMARTAF YQASGAFGFR 

      2410       2420       2430       2440       2450       2460 
DQLQDTLAFL LHEPSIARRQ ILNAASRQFR EGDVQHWWLP GTGAGVRTMI SDDVVWLSYA 

      2470       2480       2490       2500       2510       2520 
IHHYCSVTGD KSVLDEEIAF LEGPALLEGQ HDSFYKPEIS EDKASVYEHA ALALDLAIAR 

      2530       2540       2550       2560       2570       2580 
KGSNGLPLFL GGDWNDGMNR VGIGGRGTSV WLGWFLAGAL RSFIPYAEER GDKARAKRWS 

      2590       2600       2610       2620       2630       2640 
AHLKDLKKAL ETAGWDGGYY RRGTFDDGAL LGSKESPECR IDSIAQSWSV LSGEGDPARA 

      2650       2660       2670       2680       2690       2700 
VKAMDAVLDQ LVDEEARIIR LFTPPFINSA RDPGYIKAYP PGVRENGGQY THAATWVVMA 

      2710       2720       2730       2740       2750       2760 
LAELKRGDDA LRCFQILNPI THALDKASAE QYRVEPYVVA ADVYGHEPYT SRGGWTWYTG 

      2770       2780       2790       2800       2810       2820 
SAGWLYRAAV EGILGIRLKD GRLYVRPSLP SEWDGFAAEV ERGGGKYRIS VSKASNASGY 

      2830 
TLSINGSEVA DPEEGYPLG 

« Hide

References

[1]"Genome diversity and DNA divergence of Rhizobium etli."
Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001074 Genomic DNA. Translation: ACE93212.1.
RefSeqYP_001980390.1. NC_010994.1.

3D structure databases

ProteinModelPortalB3PR58.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3PR58.

Protein family/group databases

CAZyGH94. Glycoside Hydrolase Family 94.
GT84. Glycosyltransferase Family 84.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6402371.
GenomeReviewsGene locus RHECIAT_CH0004284 in contig CP001074_GR.
KEGGrec:RHECIAT_CH0004284.
PATRIC23102052. VBIRhiEtl120572_4238.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG294780.
OMAGGDWNDG.
ProtClustDBCLSK864957.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR009342. Carb-bd_put_dom.
IPR019282. DUF2329.
IPR021478. DUF3131.
IPR011013. Glyco_hydro-type_carb-bd.
IPR010383. Glyco_transf_36.
IPR010403. GT36_AF.
[Graphical view]
KOK13688.
PfamPF06204. CBM_X. 2 hits.
PF10091. DUF2329. 1 hit.
PF11329. DUF3131. 1 hit.
PF06165. Glyco_transf_36. 2 hits.
PF06205. GT36_AF. 2 hits.
[Graphical view]
SMARTSM01068. CBM_X. 2 hits.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 2 hits.
SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3PR58_RHIE6
AccessionPrimary (citable) accession number: B3PR58
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: January 25, 2012
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)