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Protein
Submitted name:

Oxoglutarate dehydrogenase E1 protein

Gene

sucA

Organism
Rhizobium etli (strain CIAT 652)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciRETL491916:GH4T-4169-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenase E1 proteinImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:RHECIAT_CH0004170Imported
OrganismiRhizobium etli (strain CIAT 652)Imported
Taxonomic identifieri491916 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000008817: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi491916.RHECIAT_CH0004170.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

B3PQ87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARQEANEQF QITSFLDGAN AAYIEQLYAR YEEDPASVDD QWRAFFKALE
60 70 80 90 100
EDPADVKKAA KGASWRKKNW PLPASGDLVS ALDGNWGIVE KAIETKVKAK
110 120 130 140 150
AEAAGKPADS TDVLQATRDS VRAIMMIRAY RMRGHLHAKL DPLGIAAAVD
160 170 180 190 200
DYHELSPENY GFTAADYDRK IFIDNVLGLE HATIREMIEI LERTYCSTLG
210 220 230 240 250
VEFMHISNPE EKAWIQERIE GPDKGVAFSA EGKKAILAKL VEAEGYEQFL
260 270 280 290 300
DVKFKGTKRF GLDGGESLIP ALEQILKRGG HLGLKEAVFG MAHRGRLNVL
310 320 330 340 350
SQVMGKPHRA IFHEFKGGSY APDEVEGSGD VKYHLGASSD REFDGNKVHV
360 370 380 390 400
SLTANPSHLE IVDPVVMGKA RAKQDMSATV WEGDIIPLSE RSKVLPLLIH
410 420 430 440 450
GDAAFAGQGV IAEILGLSGL RGHRVAGTMH VIINNQIGFT TNPAFSRSSP
460 470 480 490 500
YPSDVAKMIE APILHVNGDD PEAVVYAAKV ATEFRMKFHK PVVLDMFCYR
510 520 530 540 550
RYGHNEGDEP SFTQPKMYKV IRGHKTVLQL YAERLVREGL VTDGEVEKMK
560 570 580 590 600
ADWRAHLEQE FDAGQHYKPN KADWLDGEWS GLRTADNQDE QRRGKTAVPM
610 620 630 640 650
KTLKEIGRKL SEIPAGFNAH RTIQRFMENR SNMIQSGEGL DWAMAEALAF
660 670 680 690 700
GSLVVEGHKI RLSGQDCERG TFSQRHSVLY DQETEERYIP LANLAPTQAR
710 720 730 740 750
YEVINSMLSE EAVLGFEYGY SLARPNALTL WEAQFGDFAN GAQVVFDQFI
760 770 780 790 800
SSGERKWLRM SGLVCLLPHG YEGQGPEHSS ARLERFLQLC AEDNMQVANV
810 820 830 840 850
TTPANYFHIL RRQLKRDFRK PLILMTPKSL LRHKRAVSTL AELAGESAFH
860 870 880 890 900
RLLWDDAEVI KDGPIKLQKD SKIRRVVMCS GKVYYDLLEE REKRGIDDIY
910 920 930 940 950
LLRVEQLYPF PAKALINELS RFRNAEMVWC QEEPKNMGAW SFIDPFLEWV
960 970 980 990
LAHIDAKYQR VRYTGRPAAA SPATGLMSKH LSQLAAFLED ALGG
Length:994
Mass (Da):111,540
Last modified:September 2, 2008 - v1
Checksum:iB8B3EB0D30805824
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001074 Genomic DNA. Translation: ACE93099.1.
RefSeqiYP_001980277.1. NC_010994.1.

Genome annotation databases

EnsemblBacteriaiACE93099; ACE93099; RHECIAT_CH0004170.
GeneIDi6402257.
KEGGirec:RHECIAT_CH0004170.
PATRICi23101816. VBIRhiEtl120572_4121.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001074 Genomic DNA. Translation: ACE93099.1.
RefSeqiYP_001980277.1. NC_010994.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi491916.RHECIAT_CH0004170.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACE93099; ACE93099; RHECIAT_CH0004170.
GeneIDi6402257.
KEGGirec:RHECIAT_CH0004170.
PATRICi23101816. VBIRhiEtl120572_4121.

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciRETL491916:GH4T-4169-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome diversity and DNA divergence of Rhizobium etli."
    Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CIAT 652Imported.

Entry informationi

Entry nameiB3PQ87_RHIE6
AccessioniPrimary (citable) accession number: B3PQ87
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: January 7, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.