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B3PM19

- SYR_MYCA5

UniProt

B3PM19 - SYR_MYCA5

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Mycoplasma arthritidis (strain 158L3-1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (02 Sep 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciMART243272:GHIZ-105-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
    Alternative name(s):
    Arginyl-tRNA synthetaseUniRule annotation
    Short name:
    ArgRSUniRule annotation
    Gene namesi
    Name:argSUniRule annotation
    Ordered Locus Names:MARTH_orf134
    OrganismiMycoplasma arthritidis (strain 158L3-1)
    Taxonomic identifieri243272 [NCBI]
    Taxonomic lineageiBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma
    ProteomesiUP000008812: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 541541Arginine--tRNA ligasePRO_1000095381Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi243272.MARTH_orf134.

    Structurei

    3D structure databases

    ProteinModelPortaliB3PM19.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi123 – 13311"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0018.
    HOGENOMiHOG000247214.
    KOiK01887.
    OMAiPDIAYHI.
    OrthoDBiEOG6JB13C.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001412. aa-tRNA-synth_I_CS.
    IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.
    PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3PM19-1 [UniParc]FASTAAdd to Basket

    « Hide

    MITTKEIIIA SLNEALEKLE IKKPITLTEP KSYGDYSTNL ALTLQKELGK    50
    PAIEIAKEIV NAIDLKKHKE IVKVEVANPG FINFWVSNSV LSDLVNSINS 100
    LEDHYGDMSK EGKGAVNIEF VSANPTGFLH IGHARNAAIG ATLCNVLEKA 150
    GHRVVREYYV NDYGNQMNNL AASVFSRYQQ IFNKDFPMPD DAYKGHDMTI 200
    FADAFFKKYG DKYRNVAYTE EVKKLFRDFG REIALENIKI DLGRFGVWFD 250
    LYTSETQQYE KDRVWPVIRR LKSTYEKDGA TWLNTTKGGN DDKDRVIIKG 300
    NGESTYMCAD IAYHEQKFVE LHDPEKGKII DIWGADHSGY VERIKFSFED 350
    LGWRRDQIEI LLFQLLRVVK NGKEIKMSKR LGTSLTLREL LDLVGKDAVR 400
    YFLIERSYNS KIDFDINKVQ KSDETNPLFL IKYAHARCYQ LLEKAQIKNP 450
    IASNLENDFA QKLTNELKEY PNLIDTMAKT YKVNLLPPYL LKLAGAFNSF 500
    YSNVRISGDP NEQSYLALVK ATKIVLANAM KLMDLDIPNK M 541
    Length:541
    Mass (Da):61,896
    Last modified:September 2, 2008 - v1
    Checksum:i39FFAF7DBE0FF235
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001047 Genomic DNA. Translation: ACF07071.1.
    RefSeqiYP_001999775.1. NC_011025.1.

    Genome annotation databases

    EnsemblBacteriaiACF07071; ACF07071; MARTH_orf134.
    GeneIDi6418240.
    KEGGimat:MARTH_orf134.
    PATRICi20003305. VBIMycArt31993_0104.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001047 Genomic DNA. Translation: ACF07071.1 .
    RefSeqi YP_001999775.1. NC_011025.1.

    3D structure databases

    ProteinModelPortali B3PM19.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243272.MARTH_orf134.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACF07071 ; ACF07071 ; MARTH_orf134 .
    GeneIDi 6418240.
    KEGGi mat:MARTH_orf134.
    PATRICi 20003305. VBIMycArt31993_0104.

    Phylogenomic databases

    eggNOGi COG0018.
    HOGENOMi HOG000247214.
    KOi K01887.
    OMAi PDIAYHI.
    OrthoDBi EOG6JB13C.

    Enzyme and pathway databases

    BioCyci MART243272:GHIZ-105-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001412. aa-tRNA-synth_I_CS.
    IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 158L3-1.

    Entry informationi

    Entry nameiSYR_MYCA5
    AccessioniPrimary (citable) accession number: B3PM19
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 24, 2009
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3