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B3PK23 (B3PK23_CELJU) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
B3PK23 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: DC408CE2F0EC1E1B

FASTA40744,274
        10         20         30         40         50         60 
MAKEKFERNK PHVNVGTIGH VDHGKTTLTA ALTKVCAETW GGAFVAYDGI DNAPEEKARG 

        70         80         90        100        110        120 
ITINTSHVEY DSAVRHYAHV DCPGHADYVK NMITGAAQMD GAILVCGATD GPMPQTREHI 

       130        140        150        160        170        180 
LLSRQVGVPF IVVFLNKADL LAEDCGGVGT DEYNEMLELV EMELRELLST YDFPGDDTPI 

       190        200        210        220        230        240 
IAGSALMALN GQDDNGLGVS AVRKLVESLD AYIPEPVRAI DQPFLMPVED VFSISGRGTV 

       250        260        270        280        290        300 
VTGRVERGII KVGEEIQIVG LKDTTKTTCT GVEMFRKLLD EGRAGENVGV LLRGTKRDEV 

       310        320        330        340        350        360 
ERGQVLCKPN SVTPHTKFES EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGAVELPEG 

       370        380        390        400 
VEMVMPGDNI KMVVTLIHPI AMEEGLRFAI REGGRTVGAG VVAKIIQ 

« Hide

References

[1]"Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus."
DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J., Nelson K.E.
J. Bacteriol. 190:5455-5463(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ueda107.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000934 Genomic DNA. Translation: ACE84288.1.
CP000934 Genomic DNA. Translation: ACE86024.1.
RefSeqYP_001981194.1. NC_010995.1.
YP_001981206.1. NC_010995.1.

3D structure databases

ProteinModelPortalB3PK23.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING498211.CJA_0697.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACE84288; ACE84288; CJA_0684.
ACE86024; ACE86024; CJA_0697.
GeneID6413361.
6416468.
KEGGcja:CJA_0684.
cja:CJA_0697.
PATRIC21324741. VBICelJap122165_0677.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAVTPHTEF.
OrthoDBEOG6R5C6X.
ProtClustDBPRK12735.

Enzyme and pathway databases

BioCycCJAP498211:GHIT-684-MONOMER.
CJAP498211:GHIT-697-MONOMER.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3PK23_CELJU
AccessionPrimary (citable) accession number: B3PK23
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: February 19, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)