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B3PGN5 (GLGA_CELJU) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:CJA_1886
OrganismCellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) [Complete proteome] [HAMAP]
Taxonomic identifier498211 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaeCellvibrio

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 481481Glycogen synthase HAMAP-Rule MF_00484
PRO_1000206424

Sites

Binding site161ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B3PGN5 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 87CC35A7F2F8A52C

FASTA48153,523
        10         20         30         40         50         60 
MHSILFATSE AYPLIKTGGL ADVAASLPRA LLKLGHDVRI LLPAYESLLA KAASQGLKTL 

        70         80         90        100        110        120 
GEISLDDINL TLHQTRLPGT RVTVWLVDIP EFSARAGNPY CGADGNDWYD NHLRFYWFAR 

       130        140        150        160        170        180 
AAEAIALNQA GLNWQPDIVH CNDWQTGLIP ALLSLHPERP ATLFTIHNLA YRGLFSYQAF 

       190        200        210        220        230        240 
GELNLPPAFW HHERLEFYGQ MSFMKGGLAF ADFITTVSPS YAQEIQLPEH GYGLDGLIRY 

       250        260        270        280        290        300 
RQESLSGILN GIDTDEWNPG KDKHLAATYN RRTLGNKTKN KLALQETLGL ALNADVPLLG 

       310        320        330        340        350        360 
FIGRLVDQKG IDLILNQLPL LLEQDCQLVV LGSGFPHYEQ RLREVARQYP DRVSVTIGYD 

       370        380        390        400        410        420 
EGLAHQIEAG CDIFLMPSIF EPCGLNQMYS LRYGTLPVVH AVGGLKDTVQ ERPLDNPGED 

       430        440        450        460        470        480 
ANGFVFHSPD ALDLHAAILR ALDAYRQPAT WKQLQINAMN RDSSWEQSAK AYEAIYANLC 


S 

« Hide

References

[1]"Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus."
DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J., Nelson K.E.
J. Bacteriol. 190:5455-5463(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ueda107.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000934 Genomic DNA. Translation: ACE84974.1.
RefSeqYP_001982360.1. NC_010995.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING498211.CJA_1886.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACE84974; ACE84974; CJA_1886.
GeneID6415062.
KEGGcja:CJA_1886.
PATRIC21327162. VBICelJap122165_1860.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK711534.

Enzyme and pathway databases

BioCycCJAP498211:GHIT-1879-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_CELJU
AccessionPrimary (citable) accession number: B3PGN5
Entry history
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: September 2, 2008
Last modified: February 19, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways