glgB

Functionⁱ

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityⁱ

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayⁱ: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Active siteⁱ	419	NucleophileUniRule annotation		1
Active siteⁱ	472	Proton donorUniRule annotation		1

GO - Molecular functionⁱ

1,4-alpha-glucan branching enzyme activity Source: UniProtKB-EC
cation binding Source: InterPro
hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

Complete GO annotation...

GO - Biological processⁱ

glycogen biosynthetic process Source: UniProtKB-UniPathway

Complete GO annotation...

Keywordsⁱ

Molecular function	Glycosyltransferase, Transferase
Biological process	Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

UniPathwayⁱ	UPA00164.

UniPathwayⁱ

UPA00164.

Protein family/group databases

Carbohydrate-Active enZymes More...CAZyⁱ	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.

CAZyⁱ

CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: 1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation) Alternative name(s): 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation Alpha-(1->4)-glucan branching enzymeUniRule annotation Glycogen branching enzymeUniRule annotation Short name: BEUniRule annotation
Gene namesⁱ	Name:glgBUniRule annotation Ordered Locus Names:CJA_1885
Organismⁱ	Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa)
Taxonomic identifierⁱ	498211 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Cellvibrionales › Cellvibrionaceae › Cellvibrio › Cellvibrio japonicus
Proteomesⁱ	UP000001036 Componentⁱ: Chromosome

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
ChainⁱPRO_1000131812	1 – 737	1,4-alpha-glucan branching enzyme GlgBAdd BLAST		737

Interactionⁱ

Subunit structureⁱ

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGⁱ	498211.CJA_1885.

STRINGⁱ

498211.CJA_1885.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	B3PGN4.
SMRⁱ	B3PGN4.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Sequence similaritiesⁱ

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGⁱ	ENOG4105C9C. Bacteria. COG0296. LUCA.
HOGENOMⁱ	HOG000283037.
KEGG Orthology (KO) More...KOⁱ	K00700.
OMAⁱ	EVVHGKS.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H08D1.

Family and domain databases

Gene3Dⁱ	2.60.40.10. 2 hits.
HAMAPⁱ	MF_00685. GlgB. 1 hit.
InterProⁱ	View protein in InterPro IPR006048. A-amylase/branching_C. IPR006407. GlgB. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00128. Alpha-amylase. 1 hit. PF02806. Alpha-amylase_C. 1 hit. PF02922. CBM_48. 1 hit.
PIRSFⁱ	PIRSF000463. GlgB. 1 hit.
SMARTⁱ	View protein in SMART SM00642. Aamy. 1 hit.
SUPFAMⁱ	SSF51445. SSF51445. 1 hit. SSF81296. SSF81296. 2 hits.
TIGRFAMsⁱ	TIGR01515. branching_enzym. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

B3PGN4-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MSNPKQEQHL SQDLLRIITA THHDPFEVLG RHSLPVPTAT ADTLVRVYLP 
        60         70         80         90        100
GARSAELVIN RQNRQIAPLN RLPGTDFFEW YGLGQQLPVH YQIEWYDRHN 
       110        120        130        140        150
QHRVHYDPYA FAPQLGELDM HLFAEGQHWN IYNLLGAHPR QVDGINGVLF 
       160        170        180        190        200
ATWAPNAERI SVVGNFNDWD GRHHPMRVRG SSGLWELFIP GVQPGDLYKF 
       210        220        230        240        250
EIRNRQTGAV FLKSDPYGQS FEHRPSTSSI ITADSAFAWQ DADWMEHRAH 
       260        270        280        290        300
WDWQASPLSI YEVHLGSWRR GWAGEFLSYR ELAHQLADYV KYMGFTHVEI 
       310        320        330        340        350
LPVSEHPLDD SWGYQTTGYY APTSRFGSPD DFRYFVDHLH QQGIGIILDW 
       360        370        380        390        400
VPAHFPKDAH ALARFDGSAL YEHEDPRLGE HRDWGTLIYN YGRSEVRNFL 
       410        420        430        440        450
LANALFWLKE YHIDGLRVDA VASMLHLDYS RQPGEWIPNI HGGNENLEAM 
       460        470        480        490        500
TFLQQLNAIC HGQHSGALVI AEESTAWPQV TRPTWVGGLG FSMKWNMGWM 
       510        520        530        540        550
HDTLEYMSRE PVHRQYHHNQ LTFGMMYAFT ENFQLPFSHD EVVHGKGSMI 
       560        570        580        590        600
NKMPGDDWQK FANLRLLYTY LYTYPGSKLL FMGGEFAQWS EWAHGRSLDW 
       610        620        630        640        650
HLLDYGPHQG VQSAVKDLNH LYRQVPSLYQ RNFRGDGFEW IDCHDSTQSI 
       660        670        680        690        700
ISYIRSSDSE FTLVILNFTP VPRYNYRIGV PVAGQYQEVF NSDSQFYGGS 
       710        720        730 
NLGNANPLYT QPVPWMNHGQ SLEVTLPPLG GLLLKLA

Length:737

Mass (Da):84,963

Last modified:September 2, 2008 - v1

Checksum:ⁱAD82314B7066664B

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000934 Genomic DNA. Translation: ACE85398.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_012487502.1. NC_010995.1.

Genome annotation databases

EnsemblBacteriaⁱ	ACE85398; ACE85398; CJA_1885.
KEGGⁱ	cja:CJA_1885.

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000934 Genomic DNA. Translation: ACE85398.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_012487502.1. NC_010995.1.

3D structure databases

ProteinModelPortalⁱ	B3PGN4.
SMRⁱ	B3PGN4.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	498211.CJA_1885.

STRINGⁱ

498211.CJA_1885.

Protein family/group databases

Carbohydrate-Active enZymes More...CAZyⁱ	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.

CAZyⁱ

CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ACE85398; ACE85398; CJA_1885.
KEGGⁱ	cja:CJA_1885.

Phylogenomic databases

eggNOGⁱ	ENOG4105C9C. Bacteria. COG0296. LUCA.
HOGENOMⁱ	HOG000283037.
KEGG Orthology (KO) More...KOⁱ	K00700.
OMAⁱ	EVVHGKS.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H08D1.

Enzyme and pathway databases

UniPathwayⁱ	UPA00164.

UniPathwayⁱ

UPA00164.

Family and domain databases

Gene3Dⁱ	2.60.40.10. 2 hits.
HAMAPⁱ	MF_00685. GlgB. 1 hit.
InterProⁱ	View protein in InterPro IPR006048. A-amylase/branching_C. IPR006407. GlgB. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00128. Alpha-amylase. 1 hit. PF02806. Alpha-amylase_C. 1 hit. PF02922. CBM_48. 1 hit.
PIRSFⁱ	PIRSF000463. GlgB. 1 hit.
SMARTⁱ	View protein in SMART SM00642. Aamy. 1 hit.
SUPFAMⁱ	SSF51445. SSF51445. 1 hit. SSF81296. SSF81296. 2 hits.
TIGRFAMsⁱ	TIGR01515. branching_enzym. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	GLGB_CELJU
Accessionⁱ	B3PGN4Primary (citable) accession number: B3PGN4
Entry historyⁱ	Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
	Last sequence update:	September 2, 2008
	Last modified:	June 7, 2017
	This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Reviewed (UniProtKB/Swiss-Prot)
Annotation program	Prokaryotic Protein Annotation Program

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteome

Documents

Glycosyl hydrolases
Classification of glycosyl hydrolase families and list of entries
PATHWAY comments
Index of metabolic and biosynthesis pathways
SIMILARITY comments
Index of protein domains and families

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - B3PGN4 (GLGB_CELJU)

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1,4-alpha-glucan branching enzyme GlgB

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">‘Function’</a> section describes the metabolic pathway(s) associated with a protein.<p><a href='/help/pathway' target='_top'>More...</a></p>Pathwayi: glycogen biosynthesis

Sites

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

Protein family/group databases

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protein family/group databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Documents

Functionⁱ

Pathwayⁱ: glycogen biosynthesis

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ