B3PFB4 (B3PFB4_CELJU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase, putative, pda4C EMBL ACE85263.1
EC=4.2.2.- EMBL ACE85263.1

Gene names

Name:	pda4C EMBL ACE85263.1
Ordered Locus Names:	CJA_3428

Organism

Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) [Complete proteome] [HAMAP] EMBL ACE85263.1

Taxonomic identifier

498211 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length	288 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ACE85263.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3PFB4 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: DF10330D6A08A5C1	FASTA	288	33,477
	10 20 30 40 50 60 MEDYYHVAAF AKVIKPSEWD QWPSRVEANT QRLLQVFSDH GITITFFILG WVAERYPQLV 70 80 90 100 110 120 RDIQTQGHEI ASHGYSHQLI YRQDPQTFRR ETEKSKQLLE DITQAPITGY RAASYSITRS 130 140 150 160 170 180 SLWALDILAE LGFTWDSSIF PTRHDNYGIP GSPEEPYRII TRSGASLIEF PLTTAKVWGQ 190 200 210 220 230 240 SIPAAGGGYF RQYPYALSRW LFQRASDNQS KPQIFYLHPW EIDPEQPRVP NASWFSNFRH 250 260 270 280 YTNLKRCLPR LERMIQDFPF GTMSKSLGST RVERELHVTE LAQQPLTE

References

[1]

"Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus." DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J., Nelson K.E. J. Bacteriol. 190:5455-5463(2008) [PubMed: 18556790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000934 Genomic DNA. Translation: ACE85263.1.
RefSeq	YP_001983882.1. NC_010995.1.
3D structure databases
ProteinModelPortal	B3PFB4.
ModBase	Search...
Protein-protein interaction databases
STRING	B3PFB4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6415982.
GenomeReviews	Gene locus CJA_3428 in contig CP000934_GR.
KEGG	cja:CJA_3428.
PATRIC	21330251. VBICelJap122165_3390.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG612640.
OMA	VEDYFQV.
ProtClustDB	CLSK843416.
Family and domain databases
InterPro	IPR022560. DUF3473. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR014344. PEP-CTERM_polysacc_deacetyl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF11959. DUF3473. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03006. PepC_polyde. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3PFB4_CELJU

Accession

Primary (citable) accession number: B3PFB4

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)