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B3PEE6 (B3PEE6_CELJU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length816 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region97 – 1004Sulfate 3 binding PDB 4BA0
Region325 – 3262Sulfate 6 binding PDB 4B9Y PDB 4B9Z PDB 4BA0
Region562 – 5654Sulfate 8 binding PDB 4BA0
Region649 – 6513Sulfate 9 binding
Region732 – 7343Sulfate 10 binding PDB 4B9Y PDB 4B9Z PDB 4BA0
Region808 – 8092Sulfate 11 binding PDB 4B9Z

Sites

Binding site581Sulfate 1 PDB 4B9Y PDB 4B9Z PDB 4BA0
Binding site641Sulfate 2; via amide nitrogen
Binding site1231Sulfate 4 PDB 4BA0
Binding site2311Sulfate 1 PDB 4B9Y PDB 4B9Z PDB 4BA0
Binding site2401Sulfate 4 PDB 4BA0
Binding site2481Sulfate 4 PDB 4BA0
Binding site2511Sulfate 2
Binding site2741Sulfate 5
Binding site5541Sulfate 7; via amide nitrogen
Binding site7531Sulfate 11 PDB 4B9Z
Binding site7641Oxalic acid
Binding site7971Sulfate 7 PDB 4BA0
Binding site8101Sulfate 12; via amide nitrogen

Sequences

Sequence LengthMass (Da)Tools
B3PEE6 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 46C43AEBC564851B

FASTA81692,279
        10         20         30         40         50         60 
MFRRIAGFSP IFLMLFGSSL PTMGNPVKRE IHPDAVFYKE HKLRNDGLVI TTNQGNIRLQ 

        70         80         90        100        110        120 
FKSEAAIEVL YRADSKQLPS FALAQPESAI KAQLTETENH LQFSGGTLTA RIQKRPFAIS 

       130        140        150        160        170        180 
YYRDSELLLA EESGFQVNTD KINFRFYLSP GEKILGGGQR ILGMDRRGQR FPLYNRAHYG 

       190        200        210        220        230        240 
YSDHSGQMYF GLPAIMSSKQ YILVFDNSAS GAMDIGKTES DILQLEAKSG RSAYILVAGN 

       250        260        270        280        290        300 
SYPSLIENFT QVTGRQPLPP RWALGSFASR FGYRSEAETR ATVQKYKTED FPLDTIVLDL 

       310        320        330        340        350        360 
YWFGKDIKGH MGNLDWDKEN FPTPLDMMAD FKQQGVKTVL ITEPFVLTSS KRWDDAVKAK 

       370        380        390        400        410        420 
ALAKDPQGQP KAFELYFGNG GIIDVFSKEG SRWFSSIYKD LSKQGVAGWW GDLGEPEMHP 

       430        440        450        460        470        480 
EDTQHAIGDA DTVHNAYGHR WAEMLYQQQL DQFPELRPFI MMRAGFVGSQ RYGMIPWTGD 

       490        500        510        520        530        540 
VSRTWGGLAS QVELALQMSL LGFGYIHSDL GGFADGETLD KEMYIRWLQY GVFQPVYRPH 

       550        560        570        580        590        600 
GQDHIPSEPV FQDEETKAIL RPLVKLRYRM LPYIYTAAYQ NTLTGMPLMR PLFFSDEKNP 

       610        620        630        640        650        660 
ALIDNKTSYF WGDSLLVTPI TQAGVESVSI PAPKGVWFDF WKDTRYQTDG APLTLPTDLH 

       670        680        690        700        710        720 
TIPVLVKAGA FMPYVPAVST TEDYRSDSLE IHYYADASVP LAQGEIFEDD GKDPNSIKRN 

       730        740        750        760        770        780 
QFDLLTLQAT HTDNQLHFQL ARTGKGYRGM PERRATTLVI HNASDQYQHL DINGKTIAIA 

       790        800        810 
QADCASTPAL ACYDQERRQL QLVFTWGREA LNLRLH 

« Hide

References

« Hide 'large scale' references
[1]"Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus."
Deboy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J., Nelson K.E.
J. Bacteriol. 190:5455-5463(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ueda107 EMBL ACE84782.1.
[2]"Structural enzymology of Cellvibrio japonicus Agd31B protein reveals ?-transglucosylase activity in glycoside hydrolase family 31."
Larsbrink J., Izumi A., Hemsworth G.R., Davies G.J., Brumer H.
J. Biol. Chem. 287:43288-43299(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS) IN COMPLEX WITH OXALIC ACID AND SULFATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000934 Genomic DNA. Translation: ACE84782.1.
RefSeqYP_001983702.1. NC_010995.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4B9YX-ray1.90A1-816[»]
4B9ZX-ray2.00A1-816[»]
4BA0X-ray1.85A1-816[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING498211.CJA_3248.

Protein family/group databases

CAZyGH31. Glycoside Hydrolase Family 31.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACE84782; ACE84782; CJA_3248.
GeneID6415228.
KEGGcja:CJA_3248.
PATRIC21329891. VBICelJap122165_3210.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1501.
HOGENOMHOG000066231.
KOK01187.
OMAATWFDYY.
OrthoDBEOG67X1Q7.

Enzyme and pathway databases

BioCycCJAP498211:GHIT-3237-MONOMER.

Family and domain databases

InterProIPR011013. Gal_mutarotase_SF_dom.
IPR000322. Glyco_hydro_31.
IPR025887. Glyco_hydro_31_N_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF13802. Gal_mutarotas_2. 1 hit.
PF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3PEE6_CELJU
AccessionPrimary (citable) accession number: B3PEE6
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: June 11, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)