B3PDC4 (B3PDC4_CELJU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
N-acetylmuramoyl-L-alanine amidase EMBL ACE84746.1

Gene names

Ordered Locus Names:

CJA_3082

Organism

Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) [Complete proteome] [HAMAP] EMBL ACE84746.1

Taxonomic identifier

498211 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length	462 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	N-acetylmuramoyl-L-alanine amidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3PDC4 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 18E04F10C7DAD77C	FASTA	462	49,579
	10 20 30 40 50 60 MVLLCSSLVE AANINGVRVW RAPDHTRIVF DLDGPVVHTL STASNPERVI LDITNVKLNT 70 80 90 100 110 120 GTQGLALADT PISQIRSSVQ NQRDLRLVLD LKTRVRPNSF SLKAHGTMHD RLVLDLHDLA 130 140 150 160 170 180 LTETTAAVAP QPVVPAPVPS LNTPTAQVAK PAPAQPVRPT QEINGKRNIV VAVDAGHGGE 190 200 210 220 230 240 DPGAIGPNRL REKEVTLAIS RELVAAINAQ PGFSAKLTRT GDYFIPLKKR RDIARTMKAD 250 260 270 280 290 300 LFVSIHADAF TRASARGASV FALSRTGATS ETARFLAERE NESDLIGGVG SISLDDKDQV 310 320 330 340 350 360 LAGVLVDLSM TATLNSSLQV GSHVLRSMGG IAHLHKRQVE QAGFMVLKSP DVPSILVETG 370 380 390 400 410 420 FISNPDEARK LATPAYRKQM ADALFKGIKQ YFMQHPPAGT LLAAQMASGQ VKGIEREHTV 430 440 450 460 ASGDTLSAIA MRYGVSVNQL MRHNSMRTTT VKVGQTLKIP AS

References

[1]

"Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus." DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J., Nelson K.E. J. Bacteriol. 190:5455-5463(2008) [PubMed: 18556790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000934 Genomic DNA. Translation: ACE84746.1.
RefSeq	YP_001983536.1. NC_010995.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3PDC4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6416019.
GenomeReviews	Gene locus CJA_3082 in contig CP000934_GR.
KEGG	cja:CJA_3082.
PATRIC	21329557. VBICelJap122165_3043.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG656726.
OMA	TRITIEA.
Family and domain databases
InterPro	IPR021731. AMIN. IPR002508. CW_Hdrlase/autolysin_cat. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
Gene3D	G3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KO	K01448.
Pfam	PF01520. Amidase_3. 1 hit. PF11741. AMIN. 1 hit. PF01476. LysM. 1 hit. [Graphical view]
SMART	SM00646. Ami_3. 1 hit. SM00257. LysM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3PDC4_CELJU

Accession

Primary (citable) accession number: B3PDC4

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)