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Protein
Submitted name:

Beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N

Gene

gly43N

Organism
Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi154 – 1541CalciumCombined sources
Metal bindingi157 – 1571CalciumCombined sources
Metal bindingi165 – 1651CalciumCombined sources
Metal bindingi166 – 1661CalciumCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciCJAP498211:GHIT-3009-MONOMER.

Protein family/group databases

CAZyiGH43. Glycoside Hydrolase Family 43.

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43NImported (EC:3.2.1.-Imported)
Gene namesi
Name:gly43NImported
Ordered Locus Names:CJA_3018Imported
OrganismiCellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa)Imported
Taxonomic identifieri498211 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaCellvibrionalesCellvibrionaceaeCellvibrio
Proteomesi
  • UP000001036 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929Sequence analysisAdd
BLAST
Chaini30 – 334305Sequence analysisPRO_5002793942Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi498211.CJA_3018.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3QEDX-ray2.99A/B/C/D28-334[»]
3QEEX-ray1.64A/B28-334[»]
3QEFX-ray1.79A/B28-334[»]
ProteinModelPortaliB3PD60.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiB3PD60.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105DT9. Bacteria.
ENOG410XPHB. LUCA.
HOGENOMiHOG000292007.
OMAiYFIYHTG.
OrthoDBiPOG091H0FK4.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
InterProiIPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERiPTHR22925. PTHR22925. 1 hit.
PfamiPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMiSSF75005. SSF75005. 1 hit.

Sequencei

Sequence statusi: Complete.

B3PD60-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTSLNSRRL WLHRLCALLL GTGSALVQAE NPIFTDVFTA DPAALVHKGR
60 70 80 90 100
VYLYAGRDEA PDNTTFFVMN EWLVYSSDDM ANWEAHGPGL RAKDFTWAKG
110 120 130 140 150
DAWASQVIER NGKFYWYVTV RHDDTKPGFA IGVAVGDSPI GPFKDALGKA
160 170 180 190 200
LITNDMTTDT PIDWDDIDPS VFIDDDGQAY LFWGNTRPRY AKLKKNMVEL
210 220 230 240 250
DGPIRAIEGL PEFTEAIWVH KYQDNYYLSY AMGFPEKIGY AMGKSIKGPW
260 270 280 290 300
VYKGILNEVA GNTPTNHQAI IEFNNKHYFI YHTGAGRPDG GQYRRSVSID
310 320 330
ELFYNPDGTI KRIVMTTEGV APNKSPERVK KAAK
Length:334
Mass (Da):37,550
Last modified:September 2, 2008 - v1
Checksum:iC474606B29DD4322
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000934 Genomic DNA. Translation: ACE83886.1.

Genome annotation databases

EnsemblBacteriaiACE83886; ACE83886; CJA_3018.
KEGGicja:CJA_3018.
PATRICi21329431. VBICelJap122165_2980.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000934 Genomic DNA. Translation: ACE83886.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3QEDX-ray2.99A/B/C/D28-334[»]
3QEEX-ray1.64A/B28-334[»]
3QEFX-ray1.79A/B28-334[»]
ProteinModelPortaliB3PD60.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi498211.CJA_3018.

Protein family/group databases

CAZyiGH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACE83886; ACE83886; CJA_3018.
KEGGicja:CJA_3018.
PATRICi21329431. VBICelJap122165_2980.

Phylogenomic databases

eggNOGiENOG4105DT9. Bacteria.
ENOG410XPHB. LUCA.
HOGENOMiHOG000292007.
OMAiYFIYHTG.
OrthoDBiPOG091H0FK4.

Enzyme and pathway databases

BioCyciCJAP498211:GHIT-3009-MONOMER.

Miscellaneous databases

EvolutionaryTraceiB3PD60.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
InterProiIPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERiPTHR22925. PTHR22925. 1 hit.
PfamiPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMiSSF75005. SSF75005. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB3PD60_CELJU
AccessioniPrimary (citable) accession number: B3PD60
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: September 7, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.