Beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N

Preferred order of sections

Names and origin

Protein names

Submitted name:
Beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N EMBL ACE83886.1
EC=3.2.1.- EMBL ACE83886.1

Gene names

Name:	gly43N EMBL ACE83886.1
Ordered Locus Names:	CJA_3018

Organism

Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) [Complete proteome] [HAMAP] EMBL ACE83886.1

Taxonomic identifier

498211 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length	334 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Calcium PDB 3QED PDB 3QEE PDB 3QEF Metal-binding PDB 3QED PDB 3QEE PDB 3QEF
Molecular function	Glycosidase EMBL ACE83886.1 Hydrolase
Technical term	3D-structure PDB 3QED PDB 3QEE PDB 3QEF Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

154

1

Calcium PDB 3QED PDB 3QEE PDB 3QEF

Metal binding

157

1

Calcium PDB 3QED PDB 3QEE PDB 3QEF

Metal binding

165

1

Calcium PDB 3QED PDB 3QEE PDB 3QEF

Metal binding

166

1

Calcium PDB 3QED PDB 3QEE PDB 3QEF

Sequences

Sequence

Length

Mass (Da)

Tools

B3PD60 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: C474606B29DD4322
Show »

FASTA

334

37,550

        10         20         30         40         50         60 
MTTSLNSRRL WLHRLCALLL GTGSALVQAE NPIFTDVFTA DPAALVHKGR VYLYAGRDEA 

        70         80         90        100        110        120 
PDNTTFFVMN EWLVYSSDDM ANWEAHGPGL RAKDFTWAKG DAWASQVIER NGKFYWYVTV 

       130        140        150        160        170        180 
RHDDTKPGFA IGVAVGDSPI GPFKDALGKA LITNDMTTDT PIDWDDIDPS VFIDDDGQAY 

       190        200        210        220        230        240 
LFWGNTRPRY AKLKKNMVEL DGPIRAIEGL PEFTEAIWVH KYQDNYYLSY AMGFPEKIGY 

       250        260        270        280        290        300 
AMGKSIKGPW VYKGILNEVA GNTPTNHQAI IEFNNKHYFI YHTGAGRPDG GQYRRSVSID 

       310        320        330 
ELFYNPDGTI KRIVMTTEGV APNKSPERVK KAAK

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus." DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J., Nelson K.E. J. Bacteriol. 190:5455-5463(2008) [PubMed: 18556790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	"The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases." Cartmell A., McKee L., Pena M.J., Larsbrink J., Brumer H., Kaneko S., Ichinose H., Lewis R.J., Vikso-Nielsen A., Gilbert H.J., Marles-Wright J. J. Biol. Chem. 0:0-0(2011) [PubMed: 21339299] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.64 ANGSTROMS) OF 28-334 IN COMPLEX WITH CALCIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000934 Genomic DNA. Translation: ACE83886.1.

RefSeq

YP_001983472.1. NC_010995.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3QED	X-ray	2.99	A/B/C/D	28-334	[»]
3QEE	X-ray	1.64	A/B	28-334	[»]
3QEF	X-ray	1.79	A/B	28-334	[»]

ProteinModelPortal

B3PD60.

ModBase

Search...

Protein-protein interaction databases

STRING

B3PD60.

Protein family/group databases

CAZy

GH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

6416902.

GenomeReviews

Gene locus CJA_3018 in contig CP000934_GR.

KEGG

cja:CJA_3018.

PATRIC

21329431. VBICelJap122165_2980.

Organism-specific databases

CMR

Search...

Phylogenomic databases

HOGENOM

HBG585375.

OMA

ALITNDM.

ProtClustDB

CLSK822159.

Family and domain databases

InterPro

IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]

Gene3D

G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.

PANTHER

PTHR22925. Glyco_hydro_43. 1 hit.

Pfam

PF04616. Glyco_hydro_43. 1 hit.
[Graphical view]

SUPFAM

SSF75005. Glyco_hydro_43_beta-prop. 1 hit.

ProtoNet

Search...

Entry information

Entry name

B3PD60_CELJU

Accession

Primary (citable) accession number: B3PD60

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)