B3PD37 (B3PD37_CELJU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase, putative, amy13C EMBL ACE86376.1
EC=2.4.1.19 EMBL ACE86376.1

Gene names

Name:	amy13C EMBL ACE86376.1
Ordered Locus Names:	CJA_1402

Organism

Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) [Complete proteome] [HAMAP] EMBL ACE86376.1

Taxonomic identifier

498211 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length	738 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosyltransferase EMBL ACE86376.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro cyclomaltodextrin glucanotransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3PD37 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 5E04EDE389AC7326	FASTA	738	79,938
	10 20 30 40 50 60 MKLKTHLLVF LLATSASAQA EWFLRGTHNS WAATQMNSGG TNTMVLNNVV FSAAGSIKFD 70 80 90 100 110 120 RWGDWSENYG VGGLGGSNIS VGAGTWDIRF FTDTKNWSIS AVANYHLRGT FNSWAEGTLM 130 140 150 160 170 180 TRVGTSSVYE SCQNFTGGDG GGGPRFKIDP NGGWGDAIPA SDYVVSVGWT KITFDSSNNS 190 200 210 220 230 240 ISVQENLAAN CGVSSSSSSS VSSSSSVSSS SSSSSSSSSS SSSSEFADFR ARTIYFVFVD 250 260 270 280 290 300 RFANGNTSND NGFNAAATST VKSAGNQSEW KKYWGGDIEG LISKLDYLQA LGVSAIWVTP 310 320 330 340 350 360 LADNINAGTE GGYHGYWARD FYEVDEHLGD WALVDELVAQ MEARGMKLVL DIAPNHSNQD 370 380 390 400 410 420 DQYEFGALYK EGAFITDFAS GKNTWYNGNG AIADCGDTNP ATTCPGEWDD PWSFRNKSLY 430 440 450 460 470 480 NLSDFKHGTS SNSIADQYLI DAALKWMDHG VYAFRIDAIK HIEPSFINRF SAAVRAKNPD 490 500 510 520 530 540 TYIFGEWYNA GAGDSLSMQF LNERRGSELL DFRLRNTIED AIAGNITMTD LSAHVQSRPT 550 560 570 580 590 600 AMNGYDSWQA IFLDNHDATR TSVYLQTTGN TNHGTGKGMS KSFADARQNM GMALVMTLPG 610 620 630 640 650 660 IPTIYYGSEQ NSTWFTANND GEVGHDPYNR EMMPSFSQTT PAFTMIKALA DLRKVSPAIQ 670 680 690 700 710 720 RGSYAERWVN ADVLVFQRQQ GADCAVVAMN RGSATSITVP NLCLANGAYT SKVGSDVVNI 730 TSGSGVFNLS QNEIVVLH

References

[1]

"Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus." DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J., Nelson K.E. J. Bacteriol. 190:5455-5463(2008) [PubMed: 18556790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000934 Genomic DNA. Translation: ACE86376.1.
RefSeq	YP_001981891.1. NC_010995.1.
3D structure databases
ProteinModelPortal	B3PD37.
ModBase	Search...
Protein-protein interaction databases
STRING	B3PD37.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6414051.
GenomeReviews	Gene locus CJA_1402 in contig CP000934_GR.
KEGG	cja:CJA_1402.
PATRIC	21326184. VBICelJap122165_1382.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	NINSLAY.
ProtClustDB	CLSK2406779.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3PD37_CELJU

Accession

Primary (citable) accession number: B3PD37

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)