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B3PCK5 (B3PCK5_CELJU) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pectate lyase, putative, pel3C EMBL ACE85947.1
EC=4.2.2.2 EMBL ACE85947.1
Gene names
Name:pel3C EMBL ACE85947.1
Ordered Locus Names:CJA_2914
OrganismCellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) [Complete proteome] [HAMAP] EMBL ACE85947.1
Taxonomic identifier498211 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length315 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACE85947.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3PCK5 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: B821867D57707D61

FASTA31532,179
        10         20         30         40         50         60 
MLKKIVITAA LLGCAASVLA AANRPSGYVT ICKIGQTCSV SGTTNVAFGA SGQFVYKNLS 

        70         80         90        100        110        120 
GTFSCSVATF GSDPIPSKSV KECSIPQSGS GGTTSSSSSS SSSSSGGGSS GSITGASCSN 

       130        140        150        160        170        180 
GSTTNVSSTI LVTSGTYDGG CRVFNATSAL GDGSQSESQK PVFRVENGAT LRNVVLGNNA 

       190        200        210        220        230        240 
ADGIHFYNGG TIDNIRWSNV GEDAFTIKSS GTVNARNITG YAGEDKFIQV NAASTLNVSN 

       250        260        270        280        290        300 
CVVDNMGKFL RQNGGTTFKI VVNVDRCQIS NMKEGIFRTD SSTSTARITN SRLRNAGSIC 

       310 
IGKWASCTSS GITNY

« Hide

References

[1]"Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus."
DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J., Nelson K.E.
J. Bacteriol. 190:5455-5463(2008) [PubMed: 18556790] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000934 Genomic DNA. Translation: ACE85947.1.
RefSeqYP_001983370.1. NC_010995.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB3PCK5.

Protein family/group databases

CAZyPL3. Polysaccharide Lyase Family 3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6414214.
GenomeReviewsGene locus CJA_2914 in contig CP000934_GR.
KEGGcja:CJA_2914.
PATRIC21329211. VBICelJap122165_2871.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG401759.
OMASKSVKEC.

Family and domain databases

InterProIPR004898. Pectate_lyase_cat.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF03211. Pectate_lyase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3PCK5_CELJU
AccessionPrimary (citable) accession number: B3PCK5
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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