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B3NQ16 (B3NQ16_DROER) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length747 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
B3NQ16 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: F04465A2424A88BC

FASTA74784,751
        10         20         30         40         50         60 
MQKSITSFFK KKSDATDSPS PPKKVPKIDA KAELLDEPLI KSESASPEAK ANVEPMSVDS 

        70         80         90        100        110        120 
EEKASPVKNV KKEPKDVEDR ITDKKVTTIG LNSTSASKED MENYDPSADS YHPLKNAYWK 

       130        140        150        160        170        180 
DKKVTPYLAL ARTFQVIEET KGRLKMIDTL SNFFCSVMLV SPEDLVPSVY LSINQLAPAY 

       190        200        210        220        230        240 
EGLELGVAET TLMKAICKAT GRNLAHIKSQ THLIGDLGIV AEQSRVSQRM MFQPAPLNVR 

       250        260        270        280        290        300 
DVFRKLREIA KISGQSKMDL VYNMFVACRS SEARFFIRSL IGKLRIGIAE QSLLTALAIG 

       310        320        330        340        350        360 
LVKKNHIDEC KASKVPEVYK DEIAETTLLL KTAYCQCPNY DIIIPAILKY DIKELQDRCP 

       370        380        390        400        410        420 
MHPGMPLRPM LAQPTKGVHE VFERFGGMQI TCEWKYDGER AQIHRNEKGE ISIFSRNSEN 

       430        440        450        460        470        480 
NTAKYPDLIA RSTGLLKGDV QSYIIDSEIV AWDVERKQIL PFQVLSTRKR KNVDIEEIKV 

       490        500        510        520        530        540 
QVCVYIFDLL YINGTALVTK NLSERRKLLL EHFQEVEGEW KFATALDTND IDEVQQFLEE 

       550        560        570        580        590        600 
SIKGNCEGLM VKTLDEEATY EIAKRSRNWL KLKKDYLSNV GDSLDLVVIG GYKGKGRRTG 

       610        620        630        640        650        660 
TYGGFLLACY DTENEEYQSI CKIGTGFTDE DLQTHSEFLG KHVTDTAKSY YRYDQSLEPD 

       670        680        690        700        710        720 
HWFEPVQVWE VKCADLSLSP IHRAAIGIVD GERGISLRFP RFIRIRDDKN SENATDANQV 

       730        740 
AHMYQSQDQV KNNQKSSTQM EMEDEFY 

« Hide

References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tucson 14021-0224.01.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH954179 Genomic DNA. Translation: EDV56889.1.
RefSeqXP_001976489.1. XM_001976453.1.

3D structure databases

ProteinModelPortalB3NQ16.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0142952; FBpp0141444; FBgn0115055.
GeneID6548210.
KEGGder:Dere_GG22898.

Organism-specific databases

FlyBaseFBgn0115055. Dere\GG22898.

Phylogenomic databases

KOK10747.
OrthoDBEOG7RFTGN.
PhylomeDBB3NQ16.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3NQ16_DROER
AccessionPrimary (citable) accession number: B3NQ16
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: June 11, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)