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Protein

Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

Gene

Dere\GG13871

Organism
Drosophila erecta (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).UniRule annotation

Catalytic activityi

Succinate + a quinone = fumarate + a quinol.UniRule annotation

Cofactori

FADUniRule annotation

Pathway: tricarboxylic acid cycle

This protein is involved in step 1 of the subpathway that synthesizes fumarate from succinate (eukaryal route).UniRule annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (Dere\GG23224), Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (Dere\GG13871), Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (Dere\GG20911), Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (Dere\GG19200)
This subpathway is part of the pathway tricarboxylic acid cycle, which is itself part of Carbohydrate metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes fumarate from succinate (eukaryal route), the pathway tricarboxylic acid cycle and in Carbohydrate metabolism.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Biological processi

Electron transportUniRule annotation, Transport, Tricarboxylic acid cycleUniRule annotation

Keywords - Ligandi

FADUniRule annotation, Flavoprotein

Enzyme and pathway databases

UniPathwayiUPA00223; UER01006.

Names & Taxonomyi

Protein namesi
Recommended name:
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrialUniRule annotation (EC:1.3.5.1UniRule annotation)
Gene namesi
Name:Dere\GG13871Imported
ORF Names:Dere_GG13871Imported, GG13871Imported
OrganismiDrosophila erecta (Fruit fly)Imported
Taxonomic identifieri7220 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000008711 Componenti: Unassembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0106134. Dere\GG13871.

Subcellular locationi

  • Mitochondrion inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation; Matrix side UniRule annotation

Keywords - Cellular componenti

MembraneUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliB3NH30.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.UniRule annotation

Keywords - Domaini

Transit peptideUniRule annotation

Phylogenomic databases

KOiK00234.
OrthoDBiEOG7MH0XJ.
PhylomeDBiB3NH30.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3NH30-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRLFVRRAG QQLTRTLLGP SASRLCQVTS VRDASCKDEY SLTDHKFDAI
60 70 80 90 100
VIGAGGAGMR AGFGLAEKGF QTAIISKLFP TRSHTVAAQG GVNAALSNMD
110 120 130 140 150
KDDWKYHFYD TVKGSDWLGD QNAIHYMCRE AEKAICELDM YGMPFSRKPD
160 170 180 190 200
GKIYQRPFGG QTLDYGKGGV ARRACACADR TGHALIHTLY GQTLKHSDCC
210 220 230 240 250
HYFVDYFVLD LIMSRGACVG CLAWKLDDGT FHRFLANNTV VAAGGCGRVY
260 270 280 290 300
FSTTAGHTCT GDGNAWVSRQ ELPLMDMEFV QFHPTGIYGA GCLITEGVRG
310 320 330 340 350
EGGFFLNCKG ERFMERYAPK AKDLASRDVV ARAMTMEVLA GNGCGPLKDH
360 370 380 390 400
VHLQLHHIDA KIIRQRLPGI LVTARIFAKV DVTKEPVPVL PTVHYNMGGI
410 420 430 440 450
PTDYKGRVVT IDENGKEQVV KGLYSCGETS CASVHGANRL GANSLLDLII
460 470 480 490 500
FGRVCALDIA ANSCPGDKPP QVEDKATEKS LDNFKRLRCA DGCIPTAALR
510 520 530 540 550
IELQRTMTKH AAVFREGKLL KEGLLKVAQL CEQFKDIKIT DRTLVWNSNL
560 570 580 590 600
VETLELQNML ANSVHIITAM ENRKESRGSH AREDFNKRLD ELDYGAPLAG
610 620 630 640 650
QKKKPIEEHW RKHTMTFALG DKGCASIKYR PVVDTTLDDS VAPIPPAPRT

Y
Length:651
Mass (Da):71,707
Last modified:September 2, 2008 - v1
Checksum:i0399590BE1DEEB8B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH954178 Genomic DNA. Translation: EDV51487.1.
RefSeqiXP_001972461.1. XM_001972425.1.

Genome annotation databases

EnsemblMetazoaiFBtr0133925; FBpp0132417; FBgn0106134.
GeneIDi6544707.
KEGGider:Dere_GG13871.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH954178 Genomic DNA. Translation: EDV51487.1.
RefSeqiXP_001972461.1. XM_001972425.1.

3D structure databases

ProteinModelPortaliB3NH30.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0133925; FBpp0132417; FBgn0106134.
GeneIDi6544707.
KEGGider:Dere_GG13871.

Organism-specific databases

FlyBaseiFBgn0106134. Dere\GG13871.

Phylogenomic databases

KOiK00234.
OrthoDBiEOG7MH0XJ.
PhylomeDBiB3NH30.

Enzyme and pathway databases

UniPathwayiUPA00223; UER01006.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tucson 14021-0224.01Imported.

Entry informationi

Entry nameiB3NH30_DROER
AccessioniPrimary (citable) accession number: B3NH30
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: June 24, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.