B3NCI2 (B3NCI2_DROER) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GG14025 EMBL EDV51212.1

Gene names

Name:	GG14025 FlyBase FBgn0106287
Synonyms:	Dere\GG14025 EMBL EDV51212.1
ORF Names:	Dere_GG14025 EMBL EDV51212.1

Organism

Drosophila erecta (Fruit fly) [Complete proteome]

Taxonomic identifier

7220 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	195 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S4P family. RuleBase RU003699 Contains 1 S4 RNA-binding domain. RuleBase RU003699

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003699
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3NCI2 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 7619DFAEF8B4157F	FASTA	195	22,623
	10 20 30 40 50 60 MVNGRIPSVF SKTYVTPRRP YEKARLDQEL KIIGEYGLRN KREVWRVKYA LAKIRKAARE 70 80 90 100 110 120 LLTLDEKDEK RLFQGNALLR RLVRIGVLDE SRMKLDYVLG LKIEDFLERR LQTQVFKLGL 130 140 150 160 170 180 AKSIHHARVL IRQRHIRVRK QVVNIPSFVV RLDSQKHIDF SLKSPFGGGR PGRVKRKNLK 190 KNQGGGGGAA EEEED

References

[1]	"Evolution of genes and genomes on the Drosophila phylogeny." Drosophila 12 genomes consortium Nature 450:203-218(2007) [PubMed: 17994087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tucson 14021-0224.01.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CH954178 Genomic DNA. Translation: EDV51212.1.
RefSeq	XP_001972186.1. XM_001972150.1.
3D structure databases
ProteinModelPortal	B3NCI2.
SMR	B3NCI2. Positions 5-181.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0134079; FBpp0132571; FBgn0106287.
GeneID	6545977.
KEGG	der:Dere_GG14025.
Organism-specific databases
FlyBase	FBgn0106287. Dere\GG14025.
Phylogenomic databases
GeneTree	EMGT00050000001960.
OrthoDB	EOG4N2Z52.
PhylomeDB	B3NCI2.
Family and domain databases
InterPro	IPR022801. Ribosomal_S4/S9. IPR005710. Ribosomal_S4/S9_euk/arc. IPR001912. Ribosomal_S4/S9_N. IPR018079. Ribosomal_S4_CS. IPR002942. S4_RNA-bd. [Graphical view]
Gene3D	G3DSA:3.10.290.10. G3DSA:3.10.290.10. 1 hit.
KO	K02997.
PANTHER	PTHR11831. Ribosomal_S4. 1 hit.
Pfam	PF00163. Ribosomal_S4. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
TIGRFAMs	TIGR01018. RpsD_arch. 1 hit.
PROSITE	PS00632. RIBOSOMAL_S4. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3NCI2_DROER

Accession

Primary (citable) accession number: B3NCI2

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)