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B3LBK2

- B3LBK2_PLAKH

UniProt

B3LBK2 - B3LBK2_PLAKH

Protein

DNA ligase

Gene

PKH_140260

Organism
Plasmodium knowlesi (strain H)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (02 Sep 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotationImported

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:PKH_140260Imported
    OrganismiPlasmodium knowlesi (strain H)Imported
    Taxonomic identifieri5851 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Plasmodium)
    ProteomesiUP000000622: Chromosome 14

    Organism-specific databases

    EuPathDBiPlasmoDB:PKH_140260.

    Interactioni

    Protein-protein interaction databases

    STRINGi5850.PKH_140260.

    Structurei

    3D structure databases

    ProteinModelPortaliB3LBK2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    HOGENOMiHOG000036006.
    KOiK10747.

    Family and domain databases

    Gene3Di1.10.3260.10. 2 hits.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3LBK2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MCIGSYANMK LLVLFLIARM LLCKVYSCMR REYSYIIPFM QKNKFYRRKT    50
    NFNVKVFTNF RDSASNRRSG FLKCLSFPKK TMEGKNEETD IKEESKVKEE 100
    GKESTKRKIA SDGNTKTKKA KAKSENDVKK GSLFNCTVKE DDKVSDLTSP 150
    KFNPVHFDVS NLYLSQKDKE KHKFKDSLLF TFLTNTFNQI EELKGSGTGS 200
    KKNVAIILSN VFRVLIYYSP NDLIPAVYIT LNKVAPDYLN VEAGVGEALI 250
    LKTMSEAYSR TESSIKKDLQ QIEDLGIIAE SCSCKMRTIF PLPRLTIQSV 300
    FNELKSIPNL SGSNSQQKKR EVIKKLLVSA KTSEAKYIVR FLQQRLRIGV 350
    NSATVLQALS YAFILTRPFI PEEIVQKGKL MNEQLLSVKG SGSGEEDDNV 400
    SDSTMENEMN KVNKKKGGML NVAKQTGESP SHVKKENEKE NQSVKDEFDM 450
    NALIESIKMR NEKISKPNLF YDIGKEGDTR LLPIFKELKK SYCEINNDSD 500
    IFECMEKSVK SALCELPNIE IIIQNLLNGD DMNTLSKKCT VKAGLPVQPM 550
    LAKPTKGIQE VLDRFNNVTF TCEYKYDGER AQIHYIDKDN IKIFSRNLET 600
    MTEKYPDVIQ IVRDQIISGA TECIIDSEVV AYDIENKKIL PFQVLTTRKR 650
    KDVDIENIKV KICLFPFDLI CCNGVPVIKE PLEIRRKLLY SLLKCKEGVL 700
    CYATHSEMNN VEDMDIFLQD AIENNCEGLM VKTLLDNASY EPSRRSLNWL 750
    KVKKDYIEGL SDSVDLVPIA GYYGKGKRSG VYGAFVLATY NSETENFQTV 800
    CKAGTGFSDE ILGSLYDTLS DKIIPSKKSY YEVSDKLNPD VWFDAHYVWE 850
    VKAADLSLSP VHTAAIGVYS DDKGIGLRFP RFLRLREDKN AEQATTSQQI 900
    VDLYEAQFTY NKNKNDFNEE SESE 924
    Length:924
    Mass (Da):105,096
    Last modified:September 2, 2008 - v1
    Checksum:iBD705ABD43EC8498
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM910996 Genomic DNA. Translation: CAQ41811.1.
    RefSeqiXP_002261933.1. XM_002261897.1.

    Genome annotation databases

    EnsemblProtistsiPKH_140260; PKH_140260; PKH_140260.
    GeneIDi7323359.
    KEGGipkn:PKH_140260.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM910996 Genomic DNA. Translation: CAQ41811.1 .
    RefSeqi XP_002261933.1. XM_002261897.1.

    3D structure databases

    ProteinModelPortali B3LBK2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5850.PKH_140260.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi PKH_140260 ; PKH_140260 ; PKH_140260 .
    GeneIDi 7323359.
    KEGGi pkn:PKH_140260.

    Organism-specific databases

    EuPathDBi PlasmoDB:PKH_140260.

    Phylogenomic databases

    HOGENOMi HOG000036006.
    KOi K10747.

    Family and domain databases

    Gene3Di 1.10.3260.10. 2 hits.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HImported.

    Entry informationi

    Entry nameiB3LBK2_PLAKH
    AccessioniPrimary (citable) accession number: B3LBK2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 2, 2008
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3