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B3LBK2

- B3LBK2_PLAKH

UniProt

B3LBK2 - B3LBK2_PLAKH

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Protein

DNA ligase

Gene
PKH_140260
Organism
Plasmodium knowlesi (strain H)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PKH_140260Imported
OrganismiPlasmodium knowlesi (strain H)
Taxonomic identifieri5851 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Plasmodium)
ProteomesiUP000000622: Chromosome 14

Organism-specific databases

EuPathDBiPlasmoDB:PKH_140260.

Interactioni

Protein-protein interaction databases

STRINGi5850.PKH_140260.

Structurei

3D structure databases

ProteinModelPortaliB3LBK2.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000036006.
KOiK10747.

Family and domain databases

Gene3Di1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3LBK2-1 [UniParc]FASTAAdd to Basket

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MCIGSYANMK LLVLFLIARM LLCKVYSCMR REYSYIIPFM QKNKFYRRKT    50
NFNVKVFTNF RDSASNRRSG FLKCLSFPKK TMEGKNEETD IKEESKVKEE 100
GKESTKRKIA SDGNTKTKKA KAKSENDVKK GSLFNCTVKE DDKVSDLTSP 150
KFNPVHFDVS NLYLSQKDKE KHKFKDSLLF TFLTNTFNQI EELKGSGTGS 200
KKNVAIILSN VFRVLIYYSP NDLIPAVYIT LNKVAPDYLN VEAGVGEALI 250
LKTMSEAYSR TESSIKKDLQ QIEDLGIIAE SCSCKMRTIF PLPRLTIQSV 300
FNELKSIPNL SGSNSQQKKR EVIKKLLVSA KTSEAKYIVR FLQQRLRIGV 350
NSATVLQALS YAFILTRPFI PEEIVQKGKL MNEQLLSVKG SGSGEEDDNV 400
SDSTMENEMN KVNKKKGGML NVAKQTGESP SHVKKENEKE NQSVKDEFDM 450
NALIESIKMR NEKISKPNLF YDIGKEGDTR LLPIFKELKK SYCEINNDSD 500
IFECMEKSVK SALCELPNIE IIIQNLLNGD DMNTLSKKCT VKAGLPVQPM 550
LAKPTKGIQE VLDRFNNVTF TCEYKYDGER AQIHYIDKDN IKIFSRNLET 600
MTEKYPDVIQ IVRDQIISGA TECIIDSEVV AYDIENKKIL PFQVLTTRKR 650
KDVDIENIKV KICLFPFDLI CCNGVPVIKE PLEIRRKLLY SLLKCKEGVL 700
CYATHSEMNN VEDMDIFLQD AIENNCEGLM VKTLLDNASY EPSRRSLNWL 750
KVKKDYIEGL SDSVDLVPIA GYYGKGKRSG VYGAFVLATY NSETENFQTV 800
CKAGTGFSDE ILGSLYDTLS DKIIPSKKSY YEVSDKLNPD VWFDAHYVWE 850
VKAADLSLSP VHTAAIGVYS DDKGIGLRFP RFLRLREDKN AEQATTSQQI 900
VDLYEAQFTY NKNKNDFNEE SESE 924
Length:924
Mass (Da):105,096
Last modified:September 2, 2008 - v1
Checksum:iBD705ABD43EC8498
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM910996 Genomic DNA. Translation: CAQ41811.1.
RefSeqiXP_002261933.1. XM_002261897.1.

Genome annotation databases

EnsemblProtistsiPKH_140260; PKH_140260; PKH_140260.
GeneIDi7323359.
KEGGipkn:PKH_140260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM910996 Genomic DNA. Translation: CAQ41811.1 .
RefSeqi XP_002261933.1. XM_002261897.1.

3D structure databases

ProteinModelPortali B3LBK2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5850.PKH_140260.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi PKH_140260 ; PKH_140260 ; PKH_140260 .
GeneIDi 7323359.
KEGGi pkn:PKH_140260.

Organism-specific databases

EuPathDBi PlasmoDB:PKH_140260.

Phylogenomic databases

HOGENOMi HOG000036006.
KOi K10747.

Family and domain databases

Gene3Di 1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H.

Entry informationi

Entry nameiB3LBK2_PLAKH
AccessioniPrimary (citable) accession number: B3LBK2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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