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Protein
Submitted name:

cDNA FLJ43940 fis, clone TESTI4014175, highly similar to Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HelicaseImported, Hydrolase

Keywords - Ligandi

ATP-binding, DNA-bindingImported, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ43940 fis, clone TESTI4014175, highly similar to Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA26454.

PTM / Processingi

Proteomic databases

PaxDbiB3KWV4.
PeptideAtlasiB3KWV4.
PRIDEiB3KWV4.

Expressioni

Gene expression databases

GenevisibleiB3KWV4. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000369716.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 95DUF1086InterPro annotationAdd BLAST95

Phylogenomic databases

eggNOGiKOG0383. Eukaryota.
COG0553. LUCA.
HOVERGENiHBG102785.
KOiK11642.

Family and domain databases

InterProiIPR028722. CHD3.
IPR012957. CHD_C2.
IPR009462. DUF1086.
[Graphical view]
PANTHERiPTHR10799:SF544. PTHR10799:SF544. 2 hits.
PfamiPF08074. CHDCT2. 1 hit.
PF06461. DUF1086. 1 hit.
[Graphical view]
SMARTiSM01146. DUF1086. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3KWV4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRWGMPPQDA FTTQWLVRDL RGKTEKEFKA YVSLFMRHLC EPGADGSETF
60 70 80 90 100
ADGVPREGLS RQQVLTRIGV MSLVKKKVQE FEHINGRWSM PELMPDPSAD
110 120 130 140 150
SKRSSRASSP TKTSPTTPEA SATNSPCTSK PATPAPSEKG EGIRTPLEKE
160 170 180 190 200
EAENQEEKPE KNSRIGEKME TEADAPSPAP SLGERLEPRK IPLEDEVPGV
210 220 230 240 250
PGEMEPEPGY RGDREKSATE STPGERGEEK PLDGQEHRER PEGETGDLGK
260 270 280 290 300
RAEDVKGDRE LRPGPRDEPR SNGRREEKTE KPRFMFNIAD GGFTELHTLW
310 320 330 340 350
QNEERAAISS GKLNEIWHRR HDYWLLAGIV LHGYARWQDI QNDAQFAIIN
360 370 380 390 400
EPFKTEANKG NFLEMKNKFL ARRFKLLEQA LVIEEQLRRA AYLNLSQEPA
410 420 430 440 450
HPAMALHARF AEAECLAESH QHLSKESLAG NKPANAVLHK VLNQLEELLS
460 470 480 490 500
DMKADVTRLP ATLSRIPPIA ARLQMSERSI LSRLASKGTE PHPTPAYPPG
510 520 530 540 550
PYATPPGYGA AFSAAPVGAL AAAGANYSQM PAGSFITAAT NGPPVLVKKE
560 570
KEMVGALVSD GLDRKEPRAG EVICIDD
Length:577
Mass (Da):63,784
Last modified:September 2, 2008 - v1
Checksum:i23EACA99690835BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK125928 mRNA. Translation: BAG54266.1.
RefSeqiNP_001005271.2. NM_001005271.2.
NP_001005273.1. NM_001005273.2.
NP_005843.2. NM_005852.3.
UniGeneiHs.25601.

Genome annotation databases

GeneIDi1107.
KEGGihsa:1107.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK125928 mRNA. Translation: BAG54266.1.
RefSeqiNP_001005271.2. NM_001005271.2.
NP_001005273.1. NM_001005273.2.
NP_005843.2. NM_005852.3.
UniGeneiHs.25601.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000369716.

Proteomic databases

PaxDbiB3KWV4.
PeptideAtlasiB3KWV4.
PRIDEiB3KWV4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1107.
KEGGihsa:1107.

Organism-specific databases

CTDi1107.
PharmGKBiPA26454.

Phylogenomic databases

eggNOGiKOG0383. Eukaryota.
COG0553. LUCA.
HOVERGENiHBG102785.
KOiK11642.

Miscellaneous databases

GenomeRNAii1107.

Gene expression databases

GenevisibleiB3KWV4. HS.

Family and domain databases

InterProiIPR028722. CHD3.
IPR012957. CHD_C2.
IPR009462. DUF1086.
[Graphical view]
PANTHERiPTHR10799:SF544. PTHR10799:SF544. 2 hits.
PfamiPF08074. CHDCT2. 1 hit.
PF06461. DUF1086. 1 hit.
[Graphical view]
SMARTiSM01146. DUF1086. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB3KWV4_HUMAN
AccessioniPrimary (citable) accession number: B3KWV4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: July 6, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.