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B3KW07

- B3KW07_HUMAN

UniProt

B3KW07 - B3KW07_HUMAN

Protein
Submitted name:

cDNA FLJ41851 fis, clone NT2RI3003925, highly similar to Endothelial PAS domain-containing protein 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (02 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: Ensembl
    2. RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription Source: Ensembl

    GO - Biological processi

    1. angiogenesis Source: Ensembl
    2. blood vessel remodeling Source: Ensembl
    3. cell maturation Source: Ensembl
    4. embryonic placenta development Source: Ensembl
    5. erythrocyte differentiation Source: Ensembl
    6. lung development Source: Ensembl
    7. mitochondrion organization Source: Ensembl
    8. myoblast fate commitment Source: Ensembl
    9. norepinephrine metabolic process Source: Ensembl
    10. regulation of heart rate Source: Ensembl
    11. regulation of transcription from RNA polymerase II promoter in response to oxidative stress Source: Ensembl
    12. surfactant homeostasis Source: Ensembl
    13. visual perception Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ41851 fis, clone NT2RI3003925, highly similar to Endothelial PAS domain-containing protein 1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl
    2. nucleus Source: Ensembl
    3. transcription factor complex Source: Ensembl

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA27809.

    Expressioni

    Gene expression databases

    ArrayExpressiB3KW07.
    BgeeiB3KW07.

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG101948.
    KOiK09095.

    Family and domain databases

    InterProiIPR014887. HIF-1_TAD_C.
    [Graphical view]
    PfamiPF08778. HIF-1a_CTAD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3KW07-1 [UniParc]FASTAAdd to Basket

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    MDGEDFQLSP ICPEERLLAE NPQSTPQHCF SAMTNIFQPL APVAPHSPFL    50
    LDKFQQQLES KKTEPEHRPM SSIFFDAGSK ASLPPCCGQA STPLSSMGGR 100
    SNTQWPPDPP LHFGPTKWAV GDQRTEFLGA APLGPPVSPP HVSTFKTRSA 150
    KGFGARGPDV LSPAMVALSN KLKLKRQLEY EEQAFQDLSG GDPPGGSTSH 200
    LMWKRMKNLR GGSCPLMPDK PLSANVPNDK FTQNPMRGLG HPLRHLPLPQ 250
    PPSAISPGEN SKSRFPPQCY ATQYQDYSLS SAHKVSGMAS RLLGPSFESY 300
    LLPELTRYDC EVNVPVLGSS TLLQGGDLLR ALDQAT 336
    Length:336
    Mass (Da):36,509
    Last modified:September 2, 2008 - v1
    Checksum:iD5C86DD03FDE0B34
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK123845 mRNA. Translation: BAG53969.1.
    RefSeqiNP_001421.2. NM_001430.4.
    UniGeneiHs.468410.

    Genome annotation databases

    GeneIDi2034.
    KEGGihsa:2034.
    UCSCiuc002ruw.3. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK123845 mRNA. Translation: BAG53969.1 .
    RefSeqi NP_001421.2. NM_001430.4.
    UniGenei Hs.468410.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 2034.
    KEGGi hsa:2034.
    UCSCi uc002ruw.3. human.

    Organism-specific databases

    CTDi 2034.
    PharmGKBi PA27809.

    Phylogenomic databases

    HOVERGENi HBG101948.
    KOi K09095.

    Miscellaneous databases

    GenomeRNAii 2034.
    NextBioi 8255.

    Gene expression databases

    ArrayExpressi B3KW07.
    Bgeei B3KW07.

    Family and domain databases

    InterProi IPR014887. HIF-1_TAD_C.
    [Graphical view ]
    Pfami PF08778. HIF-1a_CTAD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiB3KW07_HUMAN
    AccessioniPrimary (citable) accession number: B3KW07
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 2, 2008
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.