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B3KW07

- B3KW07_HUMAN

UniProt

B3KW07 - B3KW07_HUMAN

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Protein
Submitted name:

cDNA FLJ41851 fis, clone NT2RI3003925, highly similar to Endothelial PAS domain-containing protein 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: Ensembl
  2. RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription Source: Ensembl

GO - Biological processi

  1. angiogenesis Source: Ensembl
  2. blood vessel remodeling Source: Ensembl
  3. cell maturation Source: Ensembl
  4. embryonic placenta development Source: Ensembl
  5. erythrocyte differentiation Source: Ensembl
  6. lung development Source: Ensembl
  7. mitochondrion organization Source: Ensembl
  8. myoblast fate commitment Source: Ensembl
  9. norepinephrine metabolic process Source: Ensembl
  10. regulation of heart rate Source: Ensembl
  11. regulation of transcription from RNA polymerase II promoter in response to oxidative stress Source: Ensembl
  12. surfactant homeostasis Source: Ensembl
  13. visual perception Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ41851 fis, clone NT2RI3003925, highly similar to Endothelial PAS domain-containing protein 1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
  2. nucleus Source: Ensembl
  3. transcription factor complex Source: Ensembl
Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA27809.

Expressioni

Gene expression databases

BgeeiB3KW07.
ExpressionAtlasiB3KW07. baseline and differential.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG101948.
KOiK09095.

Family and domain databases

InterProiIPR014887. HIF-1_TAD_C.
[Graphical view]
PfamiPF08778. HIF-1a_CTAD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3KW07-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDGEDFQLSP ICPEERLLAE NPQSTPQHCF SAMTNIFQPL APVAPHSPFL
60 70 80 90 100
LDKFQQQLES KKTEPEHRPM SSIFFDAGSK ASLPPCCGQA STPLSSMGGR
110 120 130 140 150
SNTQWPPDPP LHFGPTKWAV GDQRTEFLGA APLGPPVSPP HVSTFKTRSA
160 170 180 190 200
KGFGARGPDV LSPAMVALSN KLKLKRQLEY EEQAFQDLSG GDPPGGSTSH
210 220 230 240 250
LMWKRMKNLR GGSCPLMPDK PLSANVPNDK FTQNPMRGLG HPLRHLPLPQ
260 270 280 290 300
PPSAISPGEN SKSRFPPQCY ATQYQDYSLS SAHKVSGMAS RLLGPSFESY
310 320 330
LLPELTRYDC EVNVPVLGSS TLLQGGDLLR ALDQAT
Length:336
Mass (Da):36,509
Last modified:September 2, 2008 - v1
Checksum:iD5C86DD03FDE0B34
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK123845 mRNA. Translation: BAG53969.1.
RefSeqiNP_001421.2. NM_001430.4.
UniGeneiHs.468410.

Genome annotation databases

GeneIDi2034.
KEGGihsa:2034.
UCSCiuc002ruw.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK123845 mRNA. Translation: BAG53969.1 .
RefSeqi NP_001421.2. NM_001430.4.
UniGenei Hs.468410.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 2034.
KEGGi hsa:2034.
UCSCi uc002ruw.3. human.

Organism-specific databases

CTDi 2034.
PharmGKBi PA27809.

Phylogenomic databases

HOVERGENi HBG101948.
KOi K09095.

Miscellaneous databases

GenomeRNAii 2034.
NextBioi 8255.

Gene expression databases

Bgeei B3KW07.
ExpressionAtlasi B3KW07. baseline and differential.

Family and domain databases

InterProi IPR014887. HIF-1_TAD_C.
[Graphical view ]
Pfami PF08778. HIF-1a_CTAD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB3KW07_HUMAN
AccessioniPrimary (citable) accession number: B3KW07
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: October 29, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.