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Protein
Submitted name:

cDNA FLJ41337 fis, clone BRAMY3000254, highly similar to Liprin-alpha-1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ41337 fis, clone BRAMY3000254, highly similar to Liprin-alpha-1Imported
Submitted name:
cDNA FLJ42630 fis, clone BRACE3019084, highly similar to Liprin-alpha-1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PeptideAtlasiB3KVS8
PRIDEiB3KVS8

Structurei

3D structure databases

SMRiB3KVS8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 66SAMInterPro annotationAdd BLAST58
Domaini90 – 159SAMInterPro annotationAdd BLAST70

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili63 – 83Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0249 Eukaryota
ENOG410XP8Z LUCA
HOVERGENiHBG085266

Family and domain databases

CDDicd09565 SAM_liprin-alpha1_2_3_4_repeat, 1 hit
cd09568 SAM_liprin-alpha1_2_3_4_repeat, 1 hit
InterProiView protein in InterPro
IPR029515 Liprin
IPR037621 Liprin-alpha_SAM_rpt_2
IPR037622 Liprin-alpha_SAM_rpt_3
IPR030438 PPFIA1
IPR001660 SAM
IPR013761 SAM/pointed_sf
PANTHERiPTHR12587 PTHR12587, 1 hit
PTHR12587:SF15 PTHR12587:SF15, 1 hit
PfamiView protein in Pfam
PF00536 SAM_1, 1 hit
PF07647 SAM_2, 1 hit
SMARTiView protein in SMART
SM00454 SAM, 2 hits
SUPFAMiSSF47769 SSF47769, 2 hits
PROSITEiView protein in PROSITE
PS50105 SAM_DOMAIN, 2 hits

Sequencei

Sequence statusi: Complete.

B3KVS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNHEWIGNEW LPSLGLPQYR SYFMECLVDA RMLDHLTKKD LRGQLKMVDS
60 70 80 90 100
FHRNSFQCGI MCLRRLNYDR KELERKREES QSEIKDVLVW SNDRVIRWIL
110 120 130 140 150
SIGLKEYANN LIESGVHGAL LALDETFDFS ALALLLQIPT QNTQARAVLE
160 170 180 190 200
REFNNLLVMG TDRRFDEDDD KSFRRAPSWR KKFRPKDIRG LAAGSAETLP
210 220 230 240
ANFRVTSSMS SPSMQPKKMQ MDGNVSGTQR LDSATVRTYS C
Length:241
Mass (Da):27,886
Last modified:September 2, 2008 - v1
Checksum:iB189E9B11A2B9BAC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK123331 mRNA Translation: BAG53890.1
AK124621 mRNA Translation: BAG54059.1
RefSeqiNP_003617.1, NM_003626.3
UniGeneiHs.530749
Hs.708791

Genome annotation databases

GeneIDi8500
KEGGihsa:8500

Similar proteinsi

Entry informationi

Entry nameiB3KVS8_HUMAN
AccessioniPrimary (citable) accession number: B3KVS8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: May 23, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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