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B3KVS8

- B3KVS8_HUMAN

UniProt

B3KVS8 - B3KVS8_HUMAN

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Protein
Submitted name:

cDNA FLJ41337 fis, clone BRAMY3000254, highly similar to Liprin-alpha-1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. cell-matrix adhesion Source: InterPro
  2. negative regulation of stress fiber assembly Source: Ensembl
  3. signal transduction Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ41337 fis, clone BRAMY3000254, highly similar to Liprin-alpha-1Imported
Submitted name:
cDNA FLJ42630 fis, clone BRACE3019084, highly similar to Liprin-alpha-1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. presynaptic active zone Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG085266.

Family and domain databases

Gene3Di1.10.150.50. 1 hit.
InterProiIPR029515. Liprin.
IPR001660. SAM.
IPR013761. SAM/pointed.
IPR011510. SAM_2.
IPR021129. SAM_type1.
[Graphical view]
PANTHERiPTHR12587. PTHR12587. 1 hit.
PfamiPF00536. SAM_1. 1 hit.
PF07647. SAM_2. 1 hit.
[Graphical view]
SMARTiSM00454. SAM. 2 hits.
[Graphical view]
SUPFAMiSSF47769. SSF47769. 2 hits.
PROSITEiPS50105. SAM_DOMAIN. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3KVS8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNHEWIGNEW LPSLGLPQYR SYFMECLVDA RMLDHLTKKD LRGQLKMVDS
60 70 80 90 100
FHRNSFQCGI MCLRRLNYDR KELERKREES QSEIKDVLVW SNDRVIRWIL
110 120 130 140 150
SIGLKEYANN LIESGVHGAL LALDETFDFS ALALLLQIPT QNTQARAVLE
160 170 180 190 200
REFNNLLVMG TDRRFDEDDD KSFRRAPSWR KKFRPKDIRG LAAGSAETLP
210 220 230 240
ANFRVTSSMS SPSMQPKKMQ MDGNVSGTQR LDSATVRTYS C
Length:241
Mass (Da):27,886
Last modified:September 2, 2008 - v1
Checksum:iB189E9B11A2B9BAC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK123331 mRNA. Translation: BAG53890.1.
AK124621 mRNA. Translation: BAG54059.1.
RefSeqiNP_003617.1. NM_003626.3.
UniGeneiHs.530749.
Hs.708791.

Genome annotation databases

GeneIDi8500.
KEGGihsa:8500.
UCSCiuc001opr.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK123331 mRNA. Translation: BAG53890.1 .
AK124621 mRNA. Translation: BAG54059.1 .
RefSeqi NP_003617.1. NM_003626.3.
UniGenei Hs.530749.
Hs.708791.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 8500.
KEGGi hsa:8500.
UCSCi uc001opr.3. human.

Organism-specific databases

CTDi 8500.

Phylogenomic databases

HOVERGENi HBG085266.

Miscellaneous databases

GenomeRNAii 8500.
NextBioi 31805.

Family and domain databases

Gene3Di 1.10.150.50. 1 hit.
InterProi IPR029515. Liprin.
IPR001660. SAM.
IPR013761. SAM/pointed.
IPR011510. SAM_2.
IPR021129. SAM_type1.
[Graphical view ]
PANTHERi PTHR12587. PTHR12587. 1 hit.
Pfami PF00536. SAM_1. 1 hit.
PF07647. SAM_2. 1 hit.
[Graphical view ]
SMARTi SM00454. SAM. 2 hits.
[Graphical view ]
SUPFAMi SSF47769. SSF47769. 2 hits.
PROSITEi PS50105. SAM_DOMAIN. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: CerebellumImported.
  2. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: AmygdalaImported.

Entry informationi

Entry nameiB3KVS8_HUMAN
AccessioniPrimary (citable) accession number: B3KVS8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: November 26, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.