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B3KVS8 (B3KVS8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

cDNA FLJ42630 fis, clone BRACE3019084, highly similar to Liprin-alpha-1 EMBL BAG54059.1
OrganismHomo sapiens (Human) EMBL BAG53890.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length241 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
B3KVS8 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: B189E9B11A2B9BAC

FASTA24127,886
        10         20         30         40         50         60 
MNHEWIGNEW LPSLGLPQYR SYFMECLVDA RMLDHLTKKD LRGQLKMVDS FHRNSFQCGI 

        70         80         90        100        110        120 
MCLRRLNYDR KELERKREES QSEIKDVLVW SNDRVIRWIL SIGLKEYANN LIESGVHGAL 

       130        140        150        160        170        180 
LALDETFDFS ALALLLQIPT QNTQARAVLE REFNNLLVMG TDRRFDEDDD KSFRRAPSWR 

       190        200        210        220        230        240 
KKFRPKDIRG LAAGSAETLP ANFRVTSSMS SPSMQPKKMQ MDGNVSGTQR LDSATVRTYS 


C 

« Hide

References

[1]"NEDO human cDNA sequencing project."
Ninomiya K., Wagatsuma M., Kanda K., Kondo H., Yokoi T., Kodaira H., Furuya T., Takahashi M., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Sugiyama T., Irie R. expand/collapse author list , Otsuki T., Sato H., Wakamatsu A., Ishii S., Yamamoto J., Isono Y., Kawai-Hio Y., Saito K., Nishikawa T., Kimura K., Yamashita H., Matsuo K., Nakamura Y., Sekine M., Kikuchi H., Murakawa K., Kanehori K., Takahashi-Fujii A., Oshima A., Sugiyama A., Kawakami B., Suzuki Y., Sugano S., Nagahari K., Masuho Y., Nagai K., Isogai T.
Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Cerebellum EMBL BAG54059.1.
[2]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Amygdala EMBL BAG53890.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK123331 mRNA. Translation: BAG53890.1.
AK124621 mRNA. Translation: BAG54059.1.
RefSeqNP_003617.1. NM_003626.3.
UniGeneHs.530749.
Hs.708791.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8500.
KEGGhsa:8500.
UCSCuc001opr.3. human.

Organism-specific databases

CTD8500.

Phylogenomic databases

HOVERGENHBG085266.

Gene expression databases

ArrayExpressB3KVS8.

Family and domain databases

Gene3D1.10.150.50. 1 hit.
InterProIPR001660. SAM.
IPR013761. SAM/pointed.
IPR011510. SAM_2.
IPR021129. SAM_type1.
[Graphical view]
PfamPF00536. SAM_1. 1 hit.
PF07647. SAM_2. 1 hit.
[Graphical view]
SMARTSM00454. SAM. 2 hits.
[Graphical view]
SUPFAMSSF47769. SSF47769. 2 hits.
PROSITEPS50105. SAM_DOMAIN. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi8500.
NextBio31805.

Entry information

Entry nameB3KVS8_HUMAN
AccessionPrimary (citable) accession number: B3KVS8
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: April 16, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.