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Protein
Submitted name:

cDNA FLJ16751 fis, clone BEAST2001444, highly similar to Orphan nuclear receptor PXR

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorImported
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ16751 fis, clone BEAST2001444, highly similar to Orphan nuclear receptor PXRImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiB3KVM5.
PeptideAtlasiB3KVM5.

Expressioni

Gene expression databases

BgeeiENSG00000144852.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini133 – 292HOLIInterPro annotationAdd BLAST160

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Phylogenomic databases

eggNOGiKOG3575. Eukaryota.
ENOG410XRZC. LUCA.
HOVERGENiHBG108655.

Family and domain databases

InterProiView protein in InterPro
IPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001723. Nuclear_hrmn_rcpt.
PfamiView protein in Pfam
PF00104. Hormone_recep. 1 hit.
PRINTSiPR00398. STRDHORMONER.
SMARTiView protein in SMART
SM00430. HOLI. 1 hit.
SUPFAMiSSF48508. SSF48508. 1 hit.

Sequencei

Sequence statusi: Complete.

B3KVM5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDEAVEERR ALIKRKKSER TGTQPLGVQG LTEEQRMMIR ELMDAQMKTF
60 70 80 90 100
DTTFSHFKNF RLPGVLSSGC ELPESLQAPS REEAAKWSQV RKDLCSLKVS
110 120 130 140 150
LQLRGEDGSV WNYKPPADSG GKEIFSLLPH MADMSTYMFK GIISFAKVIS
160 170 180 190 200
YFRDLPIEDQ ISLLKGAAFE LCQLRFNTVF NAETGTWECG RLSYCLEDTA
210 220 230 240 250
GGFQQLLLEP MLKFHYMLKK LQLHEEEYVL MQAISLFSPD RPGVLQHRVV
260 270 280 290 300
DQLQEQFAIT LKSYIECNRP QPAHRFLFLK IMAMLTELRS INAQHTQRLL
310 320
RIQDIHPFAT PLMQELFGIT GS
Length:322
Mass (Da):36,950
Last modified:September 2, 2008 - v1
Checksum:i17FC53AC3342C1B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK122990 mRNA. Translation: BAG53837.1.
UniGeneiHs.7303.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiB3KVM5_HUMAN
AccessioniPrimary (citable) accession number: B3KVM5
Entry historyiIntegrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: July 5, 2017
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.