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Protein
Submitted name:

cDNA FLJ40710 fis, clone THYMU2027125, highly similar to Ubiquitin thioesterase protein OTUB1 (EC 3.4.-.-)

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ40710 fis, clone THYMU2027125, highly similar to Ubiquitin thioesterase protein OTUB1 (EC 3.4.-.-)Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134988141.

PTM / Processingi

Proteomic databases

PaxDbiB3KUV5.
PRIDEiB3KUV5.

Expressioni

Gene expression databases

GenevisibleiB3KUV5. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000402551.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini203 – 315113OTUInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG3991. Eukaryota.
ENOG410ZMN7. LUCA.
HOGENOMiHOG000171237.
HOVERGENiHBG103908.
KOiK09602.

Family and domain databases

InterProiIPR003323. OTU_dom.
IPR030298. OTUB1.
IPR019400. Peptidase_C65_otubain.
[Graphical view]
PANTHERiPTHR12931:SF19. PTHR12931:SF19. 1 hit.
PfamiPF10275. Peptidase_C65. 1 hit.
[Graphical view]
PROSITEiPS50802. OTU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3KUV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMKPSWLSRT EFSKRLLCRT LWCQSGWSSR SYTRSMLKMT TSINRRSRTS
60 70 80 90 100
TKSTRTSARP GLTATVSIGL SDSPTWRHCW MTARSCSGEK GGHWAPRQVG
110 120 130 140 150
VYLLPGRVGC VSSRVSPSFP GDGLDSGLAR RGSAVSALAS GLVEEPMLGP
160 170 180 190 200
PFHPTPRFKA VSAKSKEDLV SQGFTEFTIE DFHNTFMDLI EQVEKQTSVA
210 220 230 240 250
DLLASFNDQS TSDYLVVYLR LLTSGYLQRE SKFFEHFIEG GRTVKEFCQQ
260 270 280 290 300
EVEPMCKESD HIHIIALAQV LSVSIQVEYM DRGEGGTTNP HIFPEGSEPK
310
VYLLYRPGHY DILYK
Length:315
Mass (Da):35,313
Last modified:September 2, 2008 - v1
Checksum:i1967EB8F1B28868E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK098029 mRNA. Translation: BAG53567.1.
RefSeqiNP_060140.2. NM_017670.2.
UniGeneiHs.473788.

Genome annotation databases

GeneIDi55611.
KEGGihsa:55611.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK098029 mRNA. Translation: BAG53567.1.
RefSeqiNP_060140.2. NM_017670.2.
UniGeneiHs.473788.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000402551.

Proteomic databases

PaxDbiB3KUV5.
PRIDEiB3KUV5.

Protocols and materials databases

DNASUi55611.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi55611.
KEGGihsa:55611.

Organism-specific databases

CTDi55611.
PharmGKBiPA134988141.

Phylogenomic databases

eggNOGiKOG3991. Eukaryota.
ENOG410ZMN7. LUCA.
HOGENOMiHOG000171237.
HOVERGENiHBG103908.
KOiK09602.

Miscellaneous databases

GenomeRNAii55611.

Gene expression databases

GenevisibleiB3KUV5. HS.

Family and domain databases

InterProiIPR003323. OTU_dom.
IPR030298. OTUB1.
IPR019400. Peptidase_C65_otubain.
[Graphical view]
PANTHERiPTHR12931:SF19. PTHR12931:SF19. 1 hit.
PfamiPF10275. Peptidase_C65. 1 hit.
[Graphical view]
PROSITEiPS50802. OTU. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: ThymusImported.

Entry informationi

Entry nameiB3KUV5_HUMAN
AccessioniPrimary (citable) accession number: B3KUV5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: June 8, 2016
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.