Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B3KRE0

- B3KRE0_HUMAN

UniProt

B3KRE0 - B3KRE0_HUMAN

Protein
Submitted name:

cDNA FLJ34086 fis, clone FCBBF3005320, highly similar to Double-stranded RNA-binding protein Staufen homolog 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (02 Sep 2008)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. double-stranded RNA binding Source: Ensembl

    GO - Biological processi

    1. intracellular mRNA localization Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ34086 fis, clone FCBBF3005320, highly similar to Double-stranded RNA-binding protein Staufen homolog 1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl
    2. neuronal cell body Source: Ensembl
    3. neuron projection Source: Ensembl
    4. ribonucleoprotein complex Source: Ensembl

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA36188.

    PTM / Processingi

    Proteomic databases

    PRIDEiB3KRE0.

    Expressioni

    Gene expression databases

    ArrayExpressiB3KRE0.
    BgeeiB3KRE0.

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000231025.
    HOVERGENiHBG005013.
    KOiK17597.

    Family and domain databases

    Gene3Di3.30.160.20. 2 hits.
    InterProiIPR014720. dsRNA-bd_dom.
    [Graphical view]
    PfamiPF00035. dsrm. 2 hits.
    [Graphical view]
    SMARTiSM00358. DSRM. 1 hit.
    [Graphical view]
    PROSITEiPS50137. DS_RBD. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3KRE0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNFVTKVSV GEFVGEGEGK SKKISKKNAA IAVLEELKKL PPLPAVERVK    50
    PRIKKKTKPI VKPQTSPEYG QGINPISRLA QIQQAKKEKE PEYTLLTERG 100
    LPRRREFVMQ VKVGNHTAEG TGTNKKVAKR NAAENMLEIL GFKVPQAQPT 150
    KPALKSEEKT PIKKPGDGRK VTFFEPGSGD ENGTSNKEDE FRMPYLSHQQ 200
    LPAGILPMVP EVAQAVGVSQ GHHTKDFTRA APNPAKATVT AMIARELLYG 250
    GTSPTAETIL KNNISSGHVP HGPLTRPSEQ LDYLSRVQGF QVEYKDFPKN 300
    NKNEFVSLIN CSSQPPLISH GIGKDVESCH DMAALNILKL LSELDQQSTE 350
    MPRTGNGPMS VCGRC 365
    Length:365
    Mass (Da):40,001
    Last modified:September 2, 2008 - v1
    Checksum:i89DC9AB32A76E31C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK091405 mRNA. Translation: BAG52352.1.
    RefSeqiNP_001032405.1. NM_001037328.1.
    NP_004593.2. NM_004602.2.
    NP_059346.2. NM_017452.2.
    NP_059347.2. NM_017453.2.
    NP_059348.2. NM_017454.2.
    UniGeneiHs.596704.

    Genome annotation databases

    GeneIDi6780.
    KEGGihsa:6780.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK091405 mRNA. Translation: BAG52352.1 .
    RefSeqi NP_001032405.1. NM_001037328.1.
    NP_004593.2. NM_004602.2.
    NP_059346.2. NM_017452.2.
    NP_059347.2. NM_017453.2.
    NP_059348.2. NM_017454.2.
    UniGenei Hs.596704.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi B3KRE0.

    Protocols and materials databases

    DNASUi 6780.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 6780.
    KEGGi hsa:6780.

    Organism-specific databases

    CTDi 6780.
    PharmGKBi PA36188.

    Phylogenomic databases

    HOGENOMi HOG000231025.
    HOVERGENi HBG005013.
    KOi K17597.

    Miscellaneous databases

    GenomeRNAii 6780.
    NextBioi 26468.

    Gene expression databases

    ArrayExpressi B3KRE0.
    Bgeei B3KRE0.

    Family and domain databases

    Gene3Di 3.30.160.20. 2 hits.
    InterProi IPR014720. dsRNA-bd_dom.
    [Graphical view ]
    Pfami PF00035. dsrm. 2 hits.
    [Graphical view ]
    SMARTi SM00358. DSRM. 1 hit.
    [Graphical view ]
    PROSITEi PS50137. DS_RBD. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: BrainImported.

    Entry informationi

    Entry nameiB3KRE0_HUMAN
    AccessioniPrimary (citable) accession number: B3KRE0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 2, 2008
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.