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B3KRE0

- B3KRE0_HUMAN

UniProt

B3KRE0 - B3KRE0_HUMAN

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Protein
Submitted name: cDNA FLJ34086 fis, clone FCBBF3005320, highly similar to Double-stranded RNA-binding protein Staufen homolog 1
Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. double-stranded RNA binding Source: Ensembl

GO - Biological processi

  1. intracellular mRNA localization Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ34086 fis, clone FCBBF3005320, highly similar to Double-stranded RNA-binding protein Staufen homolog 1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
  2. neuron projection Source: Ensembl
  3. neuronal cell body Source: Ensembl
  4. ribonucleoprotein complex Source: Ensembl
Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA36188.

PTM / Processingi

Proteomic databases

PRIDEiB3KRE0.

Expressioni

Gene expression databases

ArrayExpressiB3KRE0.
BgeeiB3KRE0.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000231025.
HOVERGENiHBG005013.
KOiK17597.

Family and domain databases

Gene3Di3.30.160.20. 2 hits.
InterProiIPR014720. dsRNA-bd_dom.
[Graphical view]
PfamiPF00035. dsrm. 2 hits.
[Graphical view]
SMARTiSM00358. DSRM. 1 hit.
[Graphical view]
PROSITEiPS50137. DS_RBD. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3KRE0-1 [UniParc]FASTAAdd to Basket

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MKNFVTKVSV GEFVGEGEGK SKKISKKNAA IAVLEELKKL PPLPAVERVK    50
PRIKKKTKPI VKPQTSPEYG QGINPISRLA QIQQAKKEKE PEYTLLTERG 100
LPRRREFVMQ VKVGNHTAEG TGTNKKVAKR NAAENMLEIL GFKVPQAQPT 150
KPALKSEEKT PIKKPGDGRK VTFFEPGSGD ENGTSNKEDE FRMPYLSHQQ 200
LPAGILPMVP EVAQAVGVSQ GHHTKDFTRA APNPAKATVT AMIARELLYG 250
GTSPTAETIL KNNISSGHVP HGPLTRPSEQ LDYLSRVQGF QVEYKDFPKN 300
NKNEFVSLIN CSSQPPLISH GIGKDVESCH DMAALNILKL LSELDQQSTE 350
MPRTGNGPMS VCGRC 365
Length:365
Mass (Da):40,001
Last modified:September 2, 2008 - v1
Checksum:i89DC9AB32A76E31C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK091405 mRNA. Translation: BAG52352.1.
RefSeqiNP_001032405.1. NM_001037328.1.
NP_004593.2. NM_004602.2.
NP_059346.2. NM_017452.2.
NP_059347.2. NM_017453.2.
NP_059348.2. NM_017454.2.
UniGeneiHs.596704.

Genome annotation databases

GeneIDi6780.
KEGGihsa:6780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK091405 mRNA. Translation: BAG52352.1 .
RefSeqi NP_001032405.1. NM_001037328.1.
NP_004593.2. NM_004602.2.
NP_059346.2. NM_017452.2.
NP_059347.2. NM_017453.2.
NP_059348.2. NM_017454.2.
UniGenei Hs.596704.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi B3KRE0.

Protocols and materials databases

DNASUi 6780.
Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 6780.
KEGGi hsa:6780.

Organism-specific databases

CTDi 6780.
PharmGKBi PA36188.

Phylogenomic databases

HOGENOMi HOG000231025.
HOVERGENi HBG005013.
KOi K17597.

Miscellaneous databases

GenomeRNAii 6780.
NextBioi 26468.

Gene expression databases

ArrayExpressi B3KRE0.
Bgeei B3KRE0.

Family and domain databases

Gene3Di 3.30.160.20. 2 hits.
InterProi IPR014720. dsRNA-bd_dom.
[Graphical view ]
Pfami PF00035. dsrm. 2 hits.
[Graphical view ]
SMARTi SM00358. DSRM. 1 hit.
[Graphical view ]
PROSITEi PS50137. DS_RBD. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiB3KRE0_HUMAN
AccessioniPrimary (citable) accession number: B3KRE0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: March 19, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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