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Protein
Submitted name:

cDNA FLJ33967 fis, clone DFNES2000913, highly similar to Synapsin-2

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro

GO - Biological processi

  1. neurotransmitter secretion Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ33967 fis, clone DFNES2000913, highly similar to Synapsin-2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. synaptic vesicle membrane Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiB3KRB3.
ExpressionAtlasiB3KRB3. baseline and differential.

Family & Domainsi

Family and domain databases

Gene3Di3.30.470.20. 1 hit.
InterProiIPR013816. ATP_grasp_subdomain_2.
IPR001359. Synapsin.
IPR020898. Synapsin_ATP-bd_dom.
[Graphical view]
PANTHERiPTHR10841. PTHR10841. 1 hit.
PfamiPF02750. Synapsin_C. 1 hit.
[Graphical view]
PRINTSiPR01368. SYNAPSIN.

Sequencei

Sequence statusi: Complete.

B3KRB3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTSISGNWK TNTGSAMLEQ IAMSDRYKLW VDTCSEMFGG LDICAVKAVH
60 70 80 90 100
GKDGKDYIFE VMDCSMPLIG EHQVEDRQLI TELVISKMNQ LLSRTPALSP
110 120 130 140 150
QRPLTTQQPQ SGTLKDPDSS KTPPQRPPPQ GGPGQPQGMQ PPGKVLPPRR
160 170 180 190 200
LPPGPSLPPS SSSSSSSSSS APQRPGGPTT HGDAPSSSSS LAEAQPPLAA
210 220 230 240 250
PPQKPQPHPQ LNKSQSLTNA FSFSESSFFR SSANEDEAKA ETIRSLRKSF

ASLFSD
Length:256
Mass (Da):27,423
Last modified:September 2, 2008 - v1
Checksum:iD713A23D609F1149
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK091286 mRNA. Translation: BAG52325.1.
RefSeqiNP_598328.1. NM_133625.4.
UniGeneiHs.445503.

Genome annotation databases

GeneIDi6854.
KEGGihsa:6854.
UCSCiuc003bwn.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK091286 mRNA. Translation: BAG52325.1.
RefSeqiNP_598328.1. NM_133625.4.
UniGeneiHs.445503.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6854.
KEGGihsa:6854.
UCSCiuc003bwn.3. human.

Organism-specific databases

CTDi6854.

Miscellaneous databases

GenomeRNAii6854.
NextBioi35469502.

Gene expression databases

BgeeiB3KRB3.
ExpressionAtlasiB3KRB3. baseline and differential.

Family and domain databases

Gene3Di3.30.470.20. 1 hit.
InterProiIPR013816. ATP_grasp_subdomain_2.
IPR001359. Synapsin.
IPR020898. Synapsin_ATP-bd_dom.
[Graphical view]
PANTHERiPTHR10841. PTHR10841. 1 hit.
PfamiPF02750. Synapsin_C. 1 hit.
[Graphical view]
PRINTSiPR01368. SYNAPSIN.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB3KRB3_HUMAN
AccessioniPrimary (citable) accession number: B3KRB3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: October 29, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.