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B3KMI4

- B3KMI4_HUMAN

UniProt

B3KMI4 - B3KMI4_HUMAN

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Protein
Submitted name: cDNA FLJ11102 fis, clone PLACE1005646, highly similar to Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (DDX42), transcript variant 2, mRNA
Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. helicase activity Source: InterPro
  3. nucleic acid binding Source: InterPro
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ11102 fis, clone PLACE1005646, highly similar to Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (DDX42), transcript variant 2, mRNAImported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    PTM / Processingi

    Proteomic databases

    PRIDEiB3KMI4.

    Expressioni

    Gene expression databases

    ArrayExpressiB3KMI4.
    BgeeiB3KMI4.

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG081425.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR001650. Helicase_C.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF00271. Helicase_C. 1 hit.
    [Graphical view]
    SMARTiSM00490. HELICc. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    PROSITEiPS51194. HELICASE_CTER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3KMI4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDQSERNKVI SDFKKKDIPV LVATDVAARG LDIPSIKTVI NYDVARDIDT    50
    HTHRIGRTGR AGEKGVAYTL LTPKDSNFAG DLVRNLEGAN QHVSKELLDL 100
    AMQNAWFRKS RFKGGKGKKL NIGGGGLGYR ERPGLGSENM DRGNNNVMSN 150
    YEAYKPSTGA MGDRLTAMKA AFQSQYKSHF VAASLSNQKA GSSAAGASGW 200
    TSAGSLNSVP TNSAQQGHNS PDSPVTSAAK GIPGFGNTGN ISGAPVTYPS 250
    AGAQGVNNTA SGNNSREGTG GSNGKRERYT ENRGSSRHSH GETGNRHSDS 300
    PRHGDGGRHG DGYRHPESSS RHTDGHRHGE NRHGGSAGRH GENRGANDGR 350
    NGESRKEAFN RESKMEPKME PKVDSSKMDK VDSKTDKTAD GFAVPEPPKR 400
    KKSRWDS 407
    Length:407
    Mass (Da):43,495
    Last modified:September 2, 2008 - v1
    Checksum:iFBD0FBE686C959F1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK001964 mRNA. Translation: BAG50996.1.
    UniGeneiHs.702010.

    Genome annotation databases

    UCSCiuc010wps.2. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK001964 mRNA. Translation: BAG50996.1 .
    UniGenei Hs.702010.

    3D structure databases

    ModBasei Search...

    Proteomic databases

    PRIDEi B3KMI4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    UCSCi uc010wps.2. human.

    Phylogenomic databases

    HOVERGENi HBG081425.

    Miscellaneous databases

    NextBioi 35468882.

    Gene expression databases

    ArrayExpressi B3KMI4.
    Bgeei B3KMI4.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR001650. Helicase_C.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF00271. Helicase_C. 1 hit.
    [Graphical view ]
    SMARTi SM00490. HELICc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    PROSITEi PS51194. HELICASE_CTER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: PlacentaImported.

    Entry informationi

    Entry nameiB3KMI4_HUMAN
    AccessioniPrimary (citable) accession number: B3KMI4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 2, 2008
    Last sequence update: September 2, 2008
    Last modified: April 16, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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