B3KMI4 (B3KMI4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: cDNA FLJ11102 fis, clone PLACE1005646, highly similar to Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (DDX42), transcript variant 2, mRNA EMBL BAG50996.1
Organism	Homo sapiens (Human) EMBL BAG50996.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	407 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro helicase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3KMI4 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: FBD0FBE686C959F1	FASTA	407	43,495
	10 20 30 40 50 60 MDQSERNKVI SDFKKKDIPV LVATDVAARG LDIPSIKTVI NYDVARDIDT HTHRIGRTGR 70 80 90 100 110 120 AGEKGVAYTL LTPKDSNFAG DLVRNLEGAN QHVSKELLDL AMQNAWFRKS RFKGGKGKKL 130 140 150 160 170 180 NIGGGGLGYR ERPGLGSENM DRGNNNVMSN YEAYKPSTGA MGDRLTAMKA AFQSQYKSHF 190 200 210 220 230 240 VAASLSNQKA GSSAAGASGW TSAGSLNSVP TNSAQQGHNS PDSPVTSAAK GIPGFGNTGN 250 260 270 280 290 300 ISGAPVTYPS AGAQGVNNTA SGNNSREGTG GSNGKRERYT ENRGSSRHSH GETGNRHSDS 310 320 330 340 350 360 PRHGDGGRHG DGYRHPESSS RHTDGHRHGE NRHGGSAGRH GENRGANDGR NGESRKEAFN 370 380 390 400 RESKMEPKME PKVDSSKMDK VDSKTDKTAD GFAVPEPPKR KKSRWDS

References

[1]

"Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S. Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Placenta EMBL BAG50996.1.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK001964 mRNA. Translation: BAG50996.1.
IPI	IPI00409671.
UniGene	Hs.702010.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3KMI4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	uc010wps.2. human.
Phylogenomic databases
HOVERGEN	HBG081425.
Gene expression databases
ArrayExpress	B3KMI4.
Bgee	B3KMI4.
Family and domain databases
InterPro	IPR001650. Helicase_C. [Graphical view]
Pfam	PF00271. Helicase_C. 1 hit. [Graphical view]
SMART	SM00490. HELICc. 1 hit. [Graphical view]
PROSITE	PS51194. HELICASE_CTER. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35468882.

Entry information

Entry name

B3KMI4_HUMAN

Accession

Primary (citable) accession number: B3KMI4

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	April 3, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.