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B3KMI4

- B3KMI4_HUMAN

UniProt

B3KMI4 - B3KMI4_HUMAN

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Protein
Submitted name:

cDNA FLJ11102 fis, clone PLACE1005646, highly similar to Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (DDX42), transcript variant 2, mRNA

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. helicase activity Source: InterPro
  3. nucleic acid binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ11102 fis, clone PLACE1005646, highly similar to Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (DDX42), transcript variant 2, mRNAImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PRIDEiB3KMI4.

Expressioni

Gene expression databases

ArrayExpressiB3KMI4.
BgeeiB3KMI4.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG081425.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3KMI4-1 [UniParc]FASTAAdd to Basket

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MDQSERNKVI SDFKKKDIPV LVATDVAARG LDIPSIKTVI NYDVARDIDT    50
HTHRIGRTGR AGEKGVAYTL LTPKDSNFAG DLVRNLEGAN QHVSKELLDL 100
AMQNAWFRKS RFKGGKGKKL NIGGGGLGYR ERPGLGSENM DRGNNNVMSN 150
YEAYKPSTGA MGDRLTAMKA AFQSQYKSHF VAASLSNQKA GSSAAGASGW 200
TSAGSLNSVP TNSAQQGHNS PDSPVTSAAK GIPGFGNTGN ISGAPVTYPS 250
AGAQGVNNTA SGNNSREGTG GSNGKRERYT ENRGSSRHSH GETGNRHSDS 300
PRHGDGGRHG DGYRHPESSS RHTDGHRHGE NRHGGSAGRH GENRGANDGR 350
NGESRKEAFN RESKMEPKME PKVDSSKMDK VDSKTDKTAD GFAVPEPPKR 400
KKSRWDS 407
Length:407
Mass (Da):43,495
Last modified:September 2, 2008 - v1
Checksum:iFBD0FBE686C959F1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK001964 mRNA. Translation: BAG50996.1.
UniGeneiHs.702010.

Genome annotation databases

UCSCiuc010wps.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK001964 mRNA. Translation: BAG50996.1 .
UniGenei Hs.702010.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi B3KMI4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi uc010wps.2. human.

Phylogenomic databases

HOVERGENi HBG081425.

Miscellaneous databases

NextBioi 35468882.

Gene expression databases

ArrayExpressi B3KMI4.
Bgeei B3KMI4.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view ]
Pfami PF00271. Helicase_C. 1 hit.
[Graphical view ]
SMARTi SM00490. HELICc. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
PROSITEi PS51194. HELICASE_CTER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: PlacentaImported.

Entry informationi

Entry nameiB3KMI4_HUMAN
AccessioniPrimary (citable) accession number: B3KMI4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: April 16, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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