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Protein
Submitted name:

cDNA FLJ10905 fis, clone OVARC1000014, highly similar to Nucleoporin GLE1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ10905 fis, clone OVARC1000014, highly similar to Nucleoporin GLE1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA28718.

Expressioni

Gene expression databases

BgeeiB3KMG0.
GenevisibleiB3KMG0. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000308622.

Structurei

3D structure databases

ProteinModelPortaliB3KMG0.
SMRiB3KMG0. Positions 226-402.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG081558.
KOiK18723.

Family and domain databases

InterProiIPR012476. GLE1.
[Graphical view]
PANTHERiPTHR12960. PTHR12960. 1 hit.
PfamiPF07817. GLE1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3KMG0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQLSQQLDA SEQHKALLKV DLAAFQTRGN QLCSLISGII RASSESSYPT
60 70 80 90 100
AESQAEAERA LREMRDLLMN LGQEITRACE DKRRQDEEEA QVKLQEAQMQ
110 120 130 140 150
QGPEAHKEPP APSQGPGGKQ NEDLQVKVQD ITMQWYQQLQ DASMQCVLTF
160 170 180 190 200
EGLTNSKDSQ AKKIKMDLQK AATIPVSQIS TIAGSKLKEI FDKIHSLLSG
210 220 230 240 250
KPVQSGGRSV SVTLNPQGLD FVQYKLAEKF VKQGEEEVAS HHEAAFPIAV
260 270 280 290 300
VASGIWELHP RVGDLILAHL HKKCPYSVPF YPTFKEGMAL EDYQRMLGYQ
310 320 330 340 350
VKDSKVEQQD NFLKRMSGMI RLYAAIIQLR WPYGNRQEIH PHGLNHGWRW
360 370 380 390 400
LAQILNMEPL SDVTATLLFD FLEVCGNALM KQYQVQFWKM LILIKEDYFP
410 420 430 440
RIEAITSSGQ MGSFIRLKQF LEKCLQHKDI PVPKGFLTSS FWRS
Length:444
Mass (Da):50,393
Last modified:September 2, 2008 - v1
Checksum:iCD28467BFD38370E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK001767 mRNA. Translation: BAG50972.1.
RefSeqiNP_001490.1. NM_001499.2.
UniGeneiHs.522418.

Genome annotation databases

GeneIDi2733.
KEGGihsa:2733.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK001767 mRNA. Translation: BAG50972.1.
RefSeqiNP_001490.1. NM_001499.2.
UniGeneiHs.522418.

3D structure databases

ProteinModelPortaliB3KMG0.
SMRiB3KMG0. Positions 226-402.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000308622.

Protocols and materials databases

DNASUi2733.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi2733.
KEGGihsa:2733.

Organism-specific databases

CTDi2733.
PharmGKBiPA28718.

Phylogenomic databases

HOVERGENiHBG081558.
KOiK18723.

Miscellaneous databases

ChiTaRSiGLE1. human.
GenomeRNAii2733.
NextBioi10770.

Gene expression databases

BgeeiB3KMG0.
GenevisibleiB3KMG0. HS.

Family and domain databases

InterProiIPR012476. GLE1.
[Graphical view]
PANTHERiPTHR12960. PTHR12960. 1 hit.
PfamiPF07817. GLE1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Ovarian cancerImported.

Entry informationi

Entry nameiB3KMG0_HUMAN
AccessioniPrimary (citable) accession number: B3KMG0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: June 24, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.