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B3HZS0 (B3HZS0_ECOLX) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Xylose isomerase HAMAP MF_00455 RuleBase RU000609
EC=5.3.1.5 HAMAP MF_00455 RuleBase RU000609
Gene names
Name:xylA HAMAP MF_00455 EMBL EDV85053.1
ORF Names:EcE22_1764 EMBL EDV85053.1
OrganismEscherichia coli E22 EMBL EDV85053.1
Taxonomic identifier340185 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length440 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylose = D-xylulose. HAMAP MF_00455 RuleBase RU000609 SAAS SAAS013452

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP MF_00455

Subunit structure

Homotetramer By similarity. HAMAP MF_00455 RuleBase RU000610 SAAS SAAS013452

Subcellular location

Cytoplasm By similarity HAMAP MF_00455 RuleBase RU000610.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP MF_00455 RuleBase RU000609

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1011 By similarity HAMAP MF_00455
Active site1041 By similarity HAMAP MF_00455
Metal binding2321Magnesium 1 By similarity HAMAP MF_00455
Metal binding2681Magnesium 1 By similarity HAMAP MF_00455
Metal binding2681Magnesium 2 By similarity HAMAP MF_00455
Metal binding2711Magnesium 2 By similarity HAMAP MF_00455
Metal binding2961Magnesium 1 By similarity HAMAP MF_00455
Metal binding3071Magnesium 2 By similarity HAMAP MF_00455
Metal binding3091Magnesium 2 By similarity HAMAP MF_00455
Metal binding3391Magnesium 1 By similarity HAMAP MF_00455

Sequences

Sequence LengthMass (Da)Tools
B3HZS0 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 6E21039B6EC0561F

FASTA44049,719
        10         20         30         40         50         60 
MQAYFDQLDR VRYEGSKSSN PLAFRHYNPD ELVLGKRMEE HLRFAACYWH TFCWNGADMF 

        70         80         90        100        110        120 
GVGAFNRPWQ QPGEALALAK RKADVAFEFF HKLHVPFYCF HDVDVSPEGA SLKEYINNFA 

       130        140        150        160        170        180 
QMVDVLAGKQ EESGVKLLWG TANCFTNPRY GAGAATNPDP EVFSWAATQV VTAMEATHKL 

       190        200        210        220        230        240 
GGENYVLWGG REGYETLLNT DLRQEREQLG RFMQMVVEHK HKIGFQGTLL IEPKPQEPTK 

       250        260        270        280        290        300 
HQYDYDAATV YGFLKQFGLE KEIKLNIEAN HATLAGHSFH HEIATAIALG LFGSVDANRG 

       310        320        330        340        350        360 
DAQLGWDTDQ FPNSVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM 

       370        380        390        400        410        420 
DTMALALKIA ARMIEDGELD KRIAQRYSGW NSELGQQILK GQMSLADLAK YAQEHNLSPV 

       430        440 
HQSGRQEQLE NLVNHYLFDK

« Hide

References

[1]Rasko D.A., Rosovitz M.J., Kaper J.B., Boedecker E.C., Myers G.S.A., Seshadri R., Cer R.Z., Jiang L., Ravel J.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: E22 EMBL EDV85053.1.
[2]Rasko D., Rosovitz M., Myers G., Seshadri R., Cer R., Jiang L., Ravel J., Fricke W.F., Sebastian Y.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: E22 EMBL EDV85053.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AAJV02000001 Genomic DNA. Translation: EDV85053.1.

3D structure databases

ProteinModelPortalB3HZS0.
SMRB3HZS0. Positions 2-439.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

PATRIC26536052. VBIEscCol79205_0031.

Family and domain databases

HAMAPMF_00455. Xylose_isom_A.
[Tree]
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR012307. Xyl_isomerase_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
Gene3DG3DSA:3.20.20.150. Xyl_isomerase-like_TIM-brl. 1 hit.
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. Xyl_isomerase-like_TIM-brl. 1 hit.
TIGRFAMsTIGR02630. Xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3HZS0_ECOLX
AccessionPrimary (citable) accession number: B3HZS0
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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