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B3H5Q1

- BGL11_ARATH

UniProt

B3H5Q1 - BGL11_ARATH

Protein

Beta-glucosidase 11

Gene

BGLU11

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 2 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei45 – 451SubstrateBy similarity
    Binding sitei144 – 1441SubstrateBy similarity
    Binding sitei189 – 1891SubstrateBy similarity
    Active sitei190 – 1901Proton donorBy similarity
    Binding sitei356 – 3561SubstrateBy similarity
    Active sitei422 – 4221NucleophileBy similarity
    Binding sitei466 – 4661SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Enzyme and pathway databases

    BioCyciARA:AT1G02850-MONOMER.
    ARA:GQT-2411-MONOMER.

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 11 (EC:3.2.1.21)
    Short name:
    AtBGLU11
    Gene namesi
    Name:BGLU11
    Ordered Locus Names:At1g02850
    ORF Names:F22D16.15
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G02850.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2323Sequence AnalysisAdd
    BLAST
    Chaini24 – 521498Beta-glucosidase 11PRO_0000389574Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi209 ↔ 217By similarity
    Glycosylationi216 – 2161N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi221 – 2211N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi364 – 3641N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi388 – 3881N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Proteomic databases

    PaxDbiB3H5Q1.
    PRIDEiB3H5Q1.

    Expressioni

    Gene expression databases

    ArrayExpressiB3H5Q1.
    GenevestigatoriB3H5Q1.

    Structurei

    3D structure databases

    ProteinModelPortaliB3H5Q1.
    SMRiB3H5Q1. Positions 27-509.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni473 – 4742Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    HOGENOMiHOG000088630.
    InParanoidiA8MRZ0.
    KOiK01188.
    OMAiWTTINEV.
    PhylomeDBiB3H5Q1.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequences (5)i

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    This entry describes 5 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: B3H5Q1-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MKLLSNSLMF LPLLALALTA VSSLKYSRND FPPGFVFGSG TSAYQVEGAA    50
    DEDGRTPSIW DVFAHAGHSG VAAGNVACDQ YHKYKEDVKL MADMGLEAYR 100
    FSISWSRLLP SGRGPINPKG LQYYNNLIDE LITHGIQPHV TLHHFDLPQA 150
    LEDEYGGWLS QEIVRDFTAY ADTCFKEFGD RVSHWTTINE VNVFALGGYD 200
    QGITPPARCS PPFGLNCTKG NSSIEPYIAV HNMLLAHASA TILYKQQYKV 250
    LLSASLPSSI CIAFCYVLFI TQYKQHGSVG ISVYTYGAVP LTNSVKDKQA 300
    TARVNDFYIG WILHPLVFGD YPETMKTNVG SRLPAFTEEE SEQVKGAFDF 350
    VGVINYMALY VKDNSSSLKP NLQDFNTDIA VEMTLVGNTS IENEYANTPW 400
    SLQQILLYVK ETYGNPPVYI LENGQMTPHS SSLVDTTRVK YLSSYIKAVL 450
    HSLSRKGSDV KGYFQWSLMD VFELFGGYER SFGLLYVDFK DPSLKRSPKL 500
    SAHWYSSFLK GTLHHPSYAS S 521

    Note: Derived from EST data. No experimental confirmation available.

    Length:521
    Mass (Da):58,062
    Last modified:November 24, 2009 - v2
    Checksum:iF9A0B143B5E12C7E
    GO
    Isoform 2 (identifier: B3H5Q1-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         454-454: Missing.

    Note: Derived from EST data. No experimental confirmation available.

    Show »
    Length:520
    Mass (Da):57,975
    Checksum:i5B2241C748B3E678
    GO
    Isoform 3 (identifier: B3H5Q1-3) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         250-272: Missing.
         454-454: Missing.

    Note: Derived from EST data. No experimental confirmation available.

    Show »
    Length:497
    Mass (Da):55,504
    Checksum:i10232E0331229606
    GO
    Isoform 4 (identifier: B3H5Q1-4) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         250-296: Missing.
         454-454: Missing.

    Note: Derived from EST data. No experimental confirmation available.

    Show »
    Length:473
    Mass (Da):52,953
    Checksum:iE7B49DFF042AFB0B
    GO
    Isoform 5 (identifier: B3H5Q1-5) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         250-299: Missing.
         454-454: Missing.

    Show »
    Length:470
    Mass (Da):52,581
    Checksum:i34812E3EEF693E78
    GO

    Sequence cautioni

    The sequence AAF02882.1 differs from that shown. Reason: Erroneous gene model prediction.

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei250 – 29950Missing in isoform 5. 1 PublicationVSP_038451Add
    BLAST
    Alternative sequencei250 – 29647Missing in isoform 4. CuratedVSP_038452Add
    BLAST
    Alternative sequencei250 – 27223Missing in isoform 3. CuratedVSP_038453Add
    BLAST
    Alternative sequencei454 – 4541Missing in isoform 2, isoform 3, isoform 4 and isoform 5. 1 PublicationVSP_038454

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC009525 Genomic DNA. Translation: AAF02882.1. Sequence problems.
    CP002684 Genomic DNA. Translation: AEE27480.1.
    CP002684 Genomic DNA. Translation: AEE27481.1.
    CP002684 Genomic DNA. Translation: AEE27482.1.
    CP002684 Genomic DNA. Translation: AEE27483.1.
    CP002684 Genomic DNA. Translation: AEE27484.1.
    AY049274 mRNA. Translation: AAK83616.1.
    AY062763 mRNA. Translation: AAL32841.1.
    BT001137 mRNA. Translation: AAN64528.1.
    PIRiG86158.
    RefSeqiNP_001117217.1. NM_001123745.1. [B3H5Q1-2]
    NP_563666.1. NM_100166.3. [B3H5Q1-5]
    NP_849578.5. NM_179247.5. [B3H5Q1-3]
    NP_973745.1. NM_202016.2. [B3H5Q1-4]
    NP_973746.3. NM_202017.3. [B3H5Q1-1]
    UniGeneiAt.26199.

    Genome annotation databases

    EnsemblPlantsiAT1G02850.4; AT1G02850.4; AT1G02850. [B3H5Q1-1]
    GeneIDi839435.
    KEGGiath:AT1G02850.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC009525 Genomic DNA. Translation: AAF02882.1 . Sequence problems.
    CP002684 Genomic DNA. Translation: AEE27480.1 .
    CP002684 Genomic DNA. Translation: AEE27481.1 .
    CP002684 Genomic DNA. Translation: AEE27482.1 .
    CP002684 Genomic DNA. Translation: AEE27483.1 .
    CP002684 Genomic DNA. Translation: AEE27484.1 .
    AY049274 mRNA. Translation: AAK83616.1 .
    AY062763 mRNA. Translation: AAL32841.1 .
    BT001137 mRNA. Translation: AAN64528.1 .
    PIRi G86158.
    RefSeqi NP_001117217.1. NM_001123745.1. [B3H5Q1-2 ]
    NP_563666.1. NM_100166.3. [B3H5Q1-5 ]
    NP_849578.5. NM_179247.5. [B3H5Q1-3 ]
    NP_973745.1. NM_202016.2. [B3H5Q1-4 ]
    NP_973746.3. NM_202017.3. [B3H5Q1-1 ]
    UniGenei At.26199.

    3D structure databases

    ProteinModelPortali B3H5Q1.
    SMRi B3H5Q1. Positions 27-509.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Proteomic databases

    PaxDbi B3H5Q1.
    PRIDEi B3H5Q1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G02850.4 ; AT1G02850.4 ; AT1G02850 . [B3H5Q1-1 ]
    GeneIDi 839435.
    KEGGi ath:AT1G02850.

    Organism-specific databases

    TAIRi AT1G02850.

    Phylogenomic databases

    eggNOGi COG2723.
    HOGENOMi HOG000088630.
    InParanoidi A8MRZ0.
    KOi K01188.
    OMAi WTTINEV.
    PhylomeDBi B3H5Q1.

    Enzyme and pathway databases

    BioCyci ARA:AT1G02850-MONOMER.
    ARA:GQT-2411-MONOMER.

    Gene expression databases

    ArrayExpressi B3H5Q1.
    Genevestigatori B3H5Q1.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5).
      Strain: cv. Columbia.
    4. Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL11_ARATH
    AccessioniPrimary (citable) accession number: B3H5Q1
    Secondary accession number(s): A8MRZ0
    , Q3EDK1, Q94A86, Q9SRX8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 44 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3