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B3H5Q1 (BGL11_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-glucosidase 11

Short name=AtBGLU11
EC=3.2.1.21
Gene names
Name:BGLU11
Ordered Locus Names:At1g02850
ORF Names:F22D16.15
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length521 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Sequence caution

The sequence AAF02882.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Coding sequence diversityAlternative splicing
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Alternative products

This entry describes 5 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: B3H5Q1-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Note: Derived from EST data. No experimental confirmation available.
Isoform 2 (identifier: B3H5Q1-2)

The sequence of this isoform differs from the canonical sequence as follows:
     454-454: Missing.
Note: Derived from EST data. No experimental confirmation available.
Isoform 3 (identifier: B3H5Q1-3)

The sequence of this isoform differs from the canonical sequence as follows:
     250-272: Missing.
     454-454: Missing.
Note: Derived from EST data. No experimental confirmation available.
Isoform 4 (identifier: B3H5Q1-4)

The sequence of this isoform differs from the canonical sequence as follows:
     250-296: Missing.
     454-454: Missing.
Note: Derived from EST data. No experimental confirmation available.
Isoform 5 (identifier: B3H5Q1-5)

The sequence of this isoform differs from the canonical sequence as follows:
     250-299: Missing.
     454-454: Missing.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential
Chain24 – 521498Beta-glucosidase 11
PRO_0000389574

Regions

Region473 – 4742Substrate binding By similarity

Sites

Active site1901Proton donor By similarity
Active site4221Nucleophile By similarity
Binding site451Substrate By similarity
Binding site1441Substrate By similarity
Binding site1891Substrate By similarity
Binding site3561Substrate By similarity
Binding site4661Substrate By similarity

Amino acid modifications

Glycosylation2161N-linked (GlcNAc...) Potential
Glycosylation2211N-linked (GlcNAc...) Potential
Glycosylation3641N-linked (GlcNAc...) Potential
Glycosylation3881N-linked (GlcNAc...) Potential
Disulfide bond209 ↔ 217 By similarity

Natural variations

Alternative sequence250 – 29950Missing in isoform 5.
VSP_038451
Alternative sequence250 – 29647Missing in isoform 4.
VSP_038452
Alternative sequence250 – 27223Missing in isoform 3.
VSP_038453
Alternative sequence4541Missing in isoform 2, isoform 3, isoform 4 and isoform 5.
VSP_038454

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified November 24, 2009. Version 2.
Checksum: F9A0B143B5E12C7E

FASTA52158,062
        10         20         30         40         50         60 
MKLLSNSLMF LPLLALALTA VSSLKYSRND FPPGFVFGSG TSAYQVEGAA DEDGRTPSIW 

        70         80         90        100        110        120 
DVFAHAGHSG VAAGNVACDQ YHKYKEDVKL MADMGLEAYR FSISWSRLLP SGRGPINPKG 

       130        140        150        160        170        180 
LQYYNNLIDE LITHGIQPHV TLHHFDLPQA LEDEYGGWLS QEIVRDFTAY ADTCFKEFGD 

       190        200        210        220        230        240 
RVSHWTTINE VNVFALGGYD QGITPPARCS PPFGLNCTKG NSSIEPYIAV HNMLLAHASA 

       250        260        270        280        290        300 
TILYKQQYKV LLSASLPSSI CIAFCYVLFI TQYKQHGSVG ISVYTYGAVP LTNSVKDKQA 

       310        320        330        340        350        360 
TARVNDFYIG WILHPLVFGD YPETMKTNVG SRLPAFTEEE SEQVKGAFDF VGVINYMALY 

       370        380        390        400        410        420 
VKDNSSSLKP NLQDFNTDIA VEMTLVGNTS IENEYANTPW SLQQILLYVK ETYGNPPVYI 

       430        440        450        460        470        480 
LENGQMTPHS SSLVDTTRVK YLSSYIKAVL HSLSRKGSDV KGYFQWSLMD VFELFGGYER 

       490        500        510        520 
SFGLLYVDFK DPSLKRSPKL SAHWYSSFLK GTLHHPSYAS S 

« Hide

Isoform 2 [UniParc].

Checksum: 5B2241C748B3E678
Show »

FASTA52057,975
Isoform 3 [UniParc].

Checksum: 10232E0331229606
Show »

FASTA49755,504
Isoform 4 [UniParc].

Checksum: E7B49DFF042AFB0B
Show »

FASTA47352,953
Isoform 5 [UniParc].

Checksum: 34812E3EEF693E78
Show »

FASTA47052,581

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5).
Strain: cv. Columbia.
[4]"Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1."
Xu Z., Escamilla-Trevino L.L., Zeng L., Lalgondar M., Bevan D.R., Winkel B.S.J., Mohamed A., Cheng C.-L., Shih M.-C., Poulton J.E., Esen A.
Plant Mol. Biol. 55:343-367(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC009525 Genomic DNA. Translation: AAF02882.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE27480.1.
CP002684 Genomic DNA. Translation: AEE27481.1.
CP002684 Genomic DNA. Translation: AEE27482.1.
CP002684 Genomic DNA. Translation: AEE27483.1.
CP002684 Genomic DNA. Translation: AEE27484.1.
AY049274 mRNA. Translation: AAK83616.1.
AY062763 mRNA. Translation: AAL32841.1.
BT001137 mRNA. Translation: AAN64528.1.
PIRG86158.
RefSeqNP_001117217.1. NM_001123745.1.
NP_563666.1. NM_100166.3.
NP_849578.5. NM_179247.5.
NP_973745.1. NM_202016.2.
NP_973746.3. NM_202017.3.
UniGeneAt.26199.

3D structure databases

ProteinModelPortalB3H5Q1.
SMRB3H5Q1. Positions 27-509.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Proteomic databases

PaxDbB3H5Q1.
PRIDEB3H5Q1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G02850.4; AT1G02850.4; AT1G02850. [B3H5Q1-1]
GeneID839435.
KEGGath:AT1G02850.

Organism-specific databases

TAIRAT1G02850.

Phylogenomic databases

eggNOGCOG2723.
HOGENOMHOG000088630.
InParanoidA8MRZ0.
KOK01188.
OMAYIAVHNM.
PhylomeDBB3H5Q1.
ProtClustDBPLN02998.

Enzyme and pathway databases

BioCycARA:AT1G02850-MONOMER.
ARA:GQT-2411-MONOMER.

Gene expression databases

ArrayExpressB3H5Q1.
GenevestigatorB3H5Q1.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGL11_ARATH
AccessionPrimary (citable) accession number: B3H5Q1
Secondary accession number(s): A8MRZ0 expand/collapse secondary AC list , Q3EDK1, Q94A86, Q9SRX8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 24, 2009
Last sequence update: November 24, 2009
Last modified: April 16, 2014
This is version 42 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names