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B3FNS7 (B3FNS7_9PAST) Unreviewed, UniProtKB/TrEMBL

Last modified January 19, 2010. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:cha EMBL ACA04477.1
OrganismHaemophilus sp. 1595 EMBL ACA04477.1
Taxonomic identifier502960 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus

Protein attributes

Sequence length1610 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological processpathogenesis

Inferred from electronic annotation. Source: InterPro

   Cellular componentouter membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3FNS7 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: B575B3B9BFE0839E

FASTA1,610157,035
        10         20         30         40         50         60 
MNKIFKIIWN KTTQRLEVVS ELAKSQGKAT VSTDKRAEVT SAVDFKKSTL FRAISLALGL 

        70         80         90        100        110        120 
SAISLPAGAA SFTDNYTEGW STAWGAGNKY GERISAKDFP IVVGRNNNLA PKNSRAEGNP 

       130        140        150        160        170        180 
ASATVMGRDN NITSGLAFTV FGDRNQLNTG NVSTVVGIYN RITGGKTNKY LTVLGNNIYA 

       190        200        210        220        230        240 
QNPTESGLYI GNNLEANASP IAIGNNVYSE IGGSVIGHNA SVRARHANGG GFLTQDSGFA 

       250        260        270        280        290        300 
VGDNIKGYGN HVFFGRGINL EGGKIANVAT ADNKKGVYVG QDITSKGAKE GVLLGTNLTS 

       310        320        330        340        350        360 
NDNVAHYSVG VGSNINMTGN AENATAVGQH ITLNGKKSVA VGHNITVSAE DSVSLGSGSR 

       370        380        390        400        410        420 
AAKQGDVVLG AGSATTANTN SNLSGWTVSG TNLTASYATS VKQTAGKGVV SVGSDSVKRQ 

       430        440        450        460        470        480 
IKNVATGDVS ATSTDAVNGA QLYALSTKIG ESSSEYFHVN SNKTGNKGKT ATGATGSNSV 

       490        500        510        520        530        540 
AVGPNAKASS ESGIAIGDES KAAGSQGALA VGQNANAAHN NATAIGRNSV ANGTDSVAVG 

       550        560        570        580        590        600 
LNAIASGSSA IAMGKSANSK NNSTVALGQE ANATGIAGTA LGYRSQSTGD WTVAAGPDAR 

       610        620        630        640        650        660 
ALKNFAVAVG NNANATEVNA VAVGKSSTAG KDSSLALGNN ATANAASGDI ALGASSVTAT 

       670        680        690        700        710        720 
ANNITDFTIG TTKVSDSFVK AKGNQGVVSV GSTTVKRQIQ NVGAGDVSAI STDAINGSQL 

       730        740        750        760        770        780 
YHVATALNTL ATDAKTAAVA ADEKAGAAST AASTAASKAD AAQTTANKAK TAADGAAAAV 

       790        800        810        820        830        840 
NNSYLHVNSS KTGNRAALNE TANATGENSI ALGPNATASG TSSIAIGDEA SSTASGTVSI 

       850        860        870        880        890        900 
GQNAINRANN STVIGRNAQV TKDSTDSVAI GLGSIVTSTS ATAIGKNANA SGASSISIGQ 

       910        920        930        940        950        960 
NTLTKNSATI AVGYNITAVA NNATAVGSYT NATGEASVAL GYKIEAGSWA TAVGSNTKAT 

       970        980        990       1000       1010       1020 
GSTSAAFGNN VIASGESSLA LGYQSKATAN WAVSVGGGSQ ANGVNSTSVG RGALAAGEQA 

      1030       1040       1050       1060       1070       1080 
TAIGAVANAG KDKSLALGRG ATANTAEGDV AIGDSSLTAE VNPISELTIG NTKVSDSFQK 

      1090       1100       1110       1120       1130       1140 
ATKNGVVSVG RNDKTRIKRQ IQNVGAGDVS ATSTDAINGS QLYHVATALN TLATDAKTAA 

      1150       1160       1170       1180       1190       1200 
AVADSKATVA STAASTADSK ATVASTAAAV ADSKATVAST AASTADSKAT VASTAAAVAD 

      1210       1220       1230       1240       1250       1260 
SKATVASTAA STADSKATVA STAAAVADSK ATVASTAAST ADSKATVAST AAAVADSKAT 

      1270       1280       1290       1300       1310       1320 
VASTAASTAD SKATVASTAA AVADSKATVA STAASTADSK ATVASTAAAV ADSKATVAST 

      1330       1340       1350       1360       1370       1380 
AASTADSKAT VASTAAAVAD SKATVASTAA STADSKATVA STAAAVADSK ATVASTAAST 

      1390       1400       1410       1420       1430       1440 
ADSKATVAST AAAVADSKAE AVKETINRSG LEIDGQNTKI GSGSTYAGGS NATAIGGSAK 

      1450       1460       1470       1480       1490       1500 
ATAENTTAVG QGSEATAKGA TAIGQGAKAT AENAVAIGTG SVAAEANTVS IGSQGNERRI 

      1510       1520       1530       1540       1550       1560 
TNVAAGVNPT DAANVGQVNA VENRINNKLG KFDKKLRSGV ASAVAVANIP QVTIPGANMV 

      1570       1580       1590       1600       1610 
ALGVGNYKGQ SAVAVGYSRA SDSNRVIIKM TAGASTQRDY TFGAGIGYQW 

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References

[1]"Identification of a novel trimeric autotransporter adhesin in the cryptic genospecies of Haemophilus."
Sheets A.J., Grass S.A., Miller S.E., St Geme J.W.III.
J. Bacteriol. 190:4313-4320(2008) [PubMed: 18424521] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 1595 EMBL ACA04477.1.
[2]Mardis E.R., Fulton R.S., Sheets A.J., StGeme J.W.III.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 1595 EMBL ACA04477.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU309721 Genomic DNA. Translation: ACA04477.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

TCDB1.B.40.1.5. autotransporter-2 (AT-2) family.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR008640. Hep_Hag.
IPR008635. HIM.
IPR005594. YadA_C.
[Graphical view]
PfamPF05658. Hep_Hag. 4 hits.
PF05662. HIM. 3 hits.
PF03895. YadA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3FNS7_9PAST
AccessionPrimary (citable) accession number: B3FNS7
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: January 19, 2010
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)