B3EYM4 (B3EYM4_GEOSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
L-ribulose-5-phosphate 4-epimerase EMBL ACE73672.1

Gene names

Name:

araD EMBL ACE73672.1

Organism

Geobacillus stearothermophilus (Bacillus stearothermophilus) EMBL ACE73672.1

Taxonomic identifier

1422 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Geobacillus

Protein attributes

Sequence length	228 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	L-ribulose-phosphate 4-epimerase activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3EYM4 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 66EEC1746D950C84	FASTA	228	25,227
	10 20 30 40 50 60 MLEELKQAVL EANLQLPQYR LVTFTWGNVS GIDRERGLVV IKPSGVAYDK LTIDDMVVVD 70 80 90 100 110 120 LTGNVVEGDL KPSSDTPTHL WLYKQFPGIG GIVHTHSTWA TVWAQAGKGI PALGTTHADY 130 140 150 160 170 180 FYGEIPCTRP MTNEEIQGAY ELETGKVITE TFRFLDPLQM PGVLVHGHGP FAWGKDPANA 190 200 210 220 VHNAVVLEEV AKMAARTYML NPNAKPISQT LLDRHYLRKH GANAYYGQ

References

[1]	"Cloning and DNA sequence of the gene coding for Bacillus stearothermophilus T-6 xylanase." Gat O., Lapidot A., Alchanati I., Regueros C., Shoham Y. Appl. Environ. Microbiol. 60:1889-1896(1994) [PubMed: 8031084] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: T-6 EMBL ACE73672.1.
[2]	"The glucuronic acid utilization gene cluster from Bacillus stearothermophilus T-6." Shulami S., Gat O., Sonenshein A.L., Shoham Y. J. Bacteriol. 181:3695-3704(1999) [PubMed: 10368143] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: T-6 EMBL ACE73672.1.
[3]	"Stereochemistry of family 52 glycosyl hydrolases: a beta-xylosidase from Bacillus stearothermophilus T-6 is a retaining enzyme." Bravman T., Zolotnitsky G., Shulami S., Belakhov V., Solomon D., Baasov T., Shoham G., Shoham Y. FEBS Lett. 495:39-43(2001) [PubMed: 11322943] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: T-6 EMBL ACE73672.1.
[4]	"Biochemical characterization and identification of catalytic residues in alpha-glucuronidase from Bacillus stearothermophilus T-6." Zaide G., Shallom D., Shulami S., Zolotnitsky G., Golan G., Baasov T., Shoham G., Shoham Y. Eur. J. Biochem. 268:3006-3016(2001) [PubMed: 11358519] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: T-6 EMBL ACE73672.1.
[5]	"A two-component system regulates the expression of an ABC transporter for xylo-oligosaccharides in Geobacillus stearothermophilus." Shulami S., Zaide G., Zolotnitsky G., Langut Y., Feld G., Sonenshein A.L., Shoham Y. Appl. Environ. Microbiol. 73:874-884(2007) [PubMed: 17142383] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: T-6 EMBL ACE73672.1.
[6]	"Hemicellulose utilization cluster in Geobacillus stearothermophilus strain T-6." Shoham Y., Shulami S., Ben-David A., Langut Y. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: T-6 EMBL ACE73672.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DQ868502 Genomic DNA. Translation: ACE73672.1.
3D structure databases
ProteinModelPortal	B3EYM4.
SMR	B3EYM4. Positions 1-220.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR001303. Aldolase_II/adducin_N. IPR004661. AraD. [Graphical view]
Gene3D	G3DSA:3.40.225.10. Aldolase_II/adducin_N. 1 hit.
Pfam	PF00596. Aldolase_II. 1 hit. [Graphical view]
SMART	SM01007. Aldolase_II. 1 hit. [Graphical view]
SUPFAM	SSF53639. Aldolase_II_N. 1 hit.
TIGRFAMs	TIGR00760. AraD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3EYM4_GEOSE

Accession

Primary (citable) accession number: B3EYM4

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	January 25, 2012
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)