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Protein

Putative protein FAM25BP

Gene

FAM25BP

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative protein FAM25BP
Alternative name(s):
FAM25B pseudogene
Gene namesi
Name:FAM25BP
Synonyms:FAM25B
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:23584. FAM25BP.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8989Putative protein FAM25BPPRO_0000416046Add
BLAST

Proteomic databases

PRIDEiB3EWG4.

Expressioni

Gene expression databases

BgeeiB3EWG4.
ExpressionAtlasiB3EWG4. baseline.

Organism-specific databases

HPAiHPA044808.

Structurei

3D structure databases

ProteinModelPortaliB3EWG4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM25 family.Curated

Phylogenomic databases

InParanoidiB3EWG4.
OrthoDBiEOG71K66F.
PhylomeDBiB3EWG4.

Family and domain databases

InterProiIPR023243. FAM25.
[Graphical view]
PRINTSiPR02048. PROTEINF25.

Sequencei

Sequence statusi: Complete.

B3EWG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLGGLGKLAA EGLAHRTEKA TEGAIHAVEE VVKEVVGHAK ETGEKAIAEA
60 70 80
IKKAQESGDK KMKEITETVT NTVTNAITHA AESLDKLGQ
Length:89
Mass (Da):9,320
Last modified:March 21, 2012 - v1
Checksum:i991CD0D86C55019B
GO

Sequence cautioni

The sequence CAI12205.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL391137 Genomic DNA. Translation: CAI12205.1. Different initiation.
RefSeqiNP_001131020.1. NM_001137548.2.
NP_001131021.1. NM_001137549.1.
NP_001139629.1. NM_001146157.2.
UniGeneiHs.645212.
Hs.723078.
Hs.729945.
Hs.99249.

Genome annotation databases

GeneIDi100133093.
643161.
644054.
KEGGihsa:100133093.
hsa:643161.
hsa:644054.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL391137 Genomic DNA. Translation: CAI12205.1. Different initiation.
RefSeqiNP_001131020.1. NM_001137548.2.
NP_001131021.1. NM_001137549.1.
NP_001139629.1. NM_001146157.2.
UniGeneiHs.645212.
Hs.723078.
Hs.729945.
Hs.99249.

3D structure databases

ProteinModelPortaliB3EWG4.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB3EWG4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100133093.
643161.
644054.
KEGGihsa:100133093.
hsa:643161.
hsa:644054.

Organism-specific databases

CTDi100133093.
643161.
644054.
GeneCardsiGC10M047177.
HGNCiHGNC:23584. FAM25BP.
HPAiHPA044808.
neXtProtiNX_B3EWG4.
GenAtlasiSearch...

Phylogenomic databases

InParanoidiB3EWG4.
OrthoDBiEOG71K66F.
PhylomeDBiB3EWG4.

Miscellaneous databases

NextBioi20789290.
PROiB3EWG4.

Gene expression databases

BgeeiB3EWG4.
ExpressionAtlasiB3EWG4. baseline.

Family and domain databases

InterProiIPR023243. FAM25.
[Graphical view]
PRINTSiPR02048. PROTEINF25.
ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence and comparative analysis of human chromosome 10."
    Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
    , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
    Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiFM25B_HUMAN
AccessioniPrimary (citable) accession number: B3EWG4
Secondary accession number(s): B2RV02, Q5VTM1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 21, 2012
Last sequence update: March 21, 2012
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 10
    Human chromosome 10: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.