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B3EU40 (B3EU40_AMOA5) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Chromosomal replication initiator protein DnaA HAMAP MF_00377
Gene names
Name:dnaA HAMAP MF_00377
Ordered Locus Names:Aasi_0001
OrganismAmoebophilus asiaticus (strain 5a2) [Complete proteome] [HAMAP]
Taxonomic identifier452471 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Candidatus Amoebophilus

Protein attributes

Sequence length477 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids By similarity. HAMAP MF_00377 RuleBase RU000577

Subcellular location

Cytoplasm By similarity HAMAP MF_00377.

Sequence similarities

Belongs to the DnaA family. HAMAP MF_00377 RuleBase RU004227

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding176 – 1838ATP By similarity HAMAP MF_00377

Sequences

Sequence LengthMass (Da)Tools
B3EU40 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 6946E9F432025041

FASTA47754,536
        10         20         30         40         50         60 
MPSQCELIWN NCLAFIKGQV NEQSFKTWFT PIVPKKLENN ILTIQVPSQF FYEWLEEHYL 

        70         80         90        100        110        120 
GLLRQVIMQE IGPQGRLEYS IIVDQGNNQR APVTINLPTQ RNYIQGNNNQ PSLTDSPHNP 

       130        140        150        160        170        180 
FTLKNFKDLH QASYLNPNYT FETFIEGDCN QLARSAAQAV AKKPGNNAFN PLMLYGKVGL 

       190        200        210        220        230        240 
GKTHIVQALG NEVKAHFSNK FVLYASSEQF TTQFIESLRN NSVQDFTHFY LQADVLILDD 

       250        260        270        280        290        300 
VQFLVGKEKT QEIFFHIFNH LHQSGKQIVM TSDCPPRDLK GLQERLLSRF KWGLTADLQQ 

       310        320        330        340        350        360 
PDFETRIAII KNKIQADGID IGEDLVEYIA QSVDTNIREL EGVIISLIAH ASLNKRDVDL 

       370        380        390        400        410        420 
GLAKQVLKNI VHDIDTEISI DYLHKIVTEH FNVSLESIKS KTRKKEIVIA RQVAMYLAKH 

       430        440        450        460        470 
YTNHSLKSIG QYCGGRDHST VIHAIQAVDD MLHTEHQFKA SFEEIKRKVK IKLPQAH

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References

[1]"Complete sequence of Candidatus Amoebophilus asiaticus 5a2."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Horn M., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 5a2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001102 Genomic DNA. Translation: ACE05459.1.
RefSeqYP_001957188.1. NC_010830.1.

3D structure databases

ProteinModelPortalB3EU40.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3EU40.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6377507.
GenomeReviewsGene locus Aasi_0001 in contig CP001102_GR.
KEGGaas:Aasi_0001.
PATRIC21265281. VBICanAmo76781_0001.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG695666.
OMACHTLNAL.
ProtClustDBPRK00149.

Family and domain databases

HAMAPMF_00377. DnaA_bact.
[Tree]
InterProIPR003593. ATPase_AAA+_core.
IPR001957. Chromosome_initiator_DnaA.
IPR020591. Chromosome_initiator_DnaA-like.
IPR013159. DnaA_C.
IPR013317. DnaA_Hda.
IPR010921. Trp_repressor/repl_initiator.
[Graphical view]
Gene3DG3DSA:1.10.1750.10. DnaA_C. 1 hit.
KOK02313.
PfamPF00308. Bac_DnaA. 1 hit.
PF08299. Bac_DnaA_C. 1 hit.
[Graphical view]
PRINTSPR00051. DNAA.
SMARTSM00382. AAA. 1 hit.
SM00760. Bac_DnaA_C. 1 hit.
[Graphical view]
SUPFAMSSF48295. Trp_repress_rep. 1 hit.
TIGRFAMsTIGR00362. DnaA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3EU40_AMOA5
AccessionPrimary (citable) accession number: B3EU40
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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