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B3ERZ8

- SYR_AMOA5

UniProt

B3ERZ8 - SYR_AMOA5

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Amoebophilus asiaticus (strain 5a2)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (22 Jul 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciAASI452471:GKEN-656-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
    Alternative name(s):
    Arginyl-tRNA synthetaseUniRule annotation
    Short name:
    ArgRSUniRule annotation
    Gene namesi
    Name:argSUniRule annotation
    Ordered Locus Names:Aasi_0599
    OrganismiAmoebophilus asiaticus (strain 5a2)
    Taxonomic identifieri452471 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesAmoebophilaceaeCandidatus Amoebophilus
    ProteomesiUP000001227: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 596596Arginine--tRNA ligasePRO_1000095332Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi452471.Aasi_0599.

    Structurei

    3D structure databases

    ProteinModelPortaliB3ERZ8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi123 – 13311"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0018.
    HOGENOMiHOG000247211.
    KOiK01887.
    OMAiPDIAYHI.
    OrthoDBiEOG6JB13C.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001412. aa-tRNA-synth_I_CS.
    IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.
    PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3ERZ8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNIDLVLREA IQNAFQSVFE LSIPLADVNL QPTRKEFEGT HTLIVFPFTT    50
    TCKVSPEVIA NKIGDWMQTN TQAIASYNVV KGFLNLSIKD TIWLASFNQM 100
    YQNKHFGYLP SNRQKIVVEY SSPNTNKPLH LGHLRNNFLG HAVSEILQAA 150
    GYEVYKVNLV NDRGIHICKS MVAYQHWGRG ETPESRGLKG DQLVGKYYVK 200
    FDQVYKEQVA ALTQTLGDAE QAAKQAPLLQ EAQVMLKQWE AGNEEVLALW 250
    RKMNGWVYDG FDITYQKLGI TFDKVYYESQ TYLLGKEVVA EGLAKGTFYK 300
    KQDGSVWIDL TQEGLDEKLL LRADGTSVYI TQDLGTADLR YQDFKPNKLV 350
    YVVGNEQDYH FEVLAKIMAR LGRPYATDLY HLSYGMVDLP TGKMKSREGT 400
    VVDADMLIDE MIETAEEHTR ELGKIDGFSK EEAKDLYHIL AMGALKYFLL 450
    RVDAKKRLLF DPQASIDFQG DTGPFIQYTH ARIAAVLRKV QQADIAFNDI 500
    VEQENFVLHP LEREVIVELA AFPKKLQESA LAYAPAILAQ HVLEIAKAYN 550
    RMYAELSILH EQDTKVQLFR IQLSVLVAQV IKTVMHLLGI VVPERM 596
    Length:596
    Mass (Da):67,709
    Last modified:July 22, 2008 - v1
    Checksum:iB43FCCE03112DB49
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001102 Genomic DNA. Translation: ACE06000.1.
    RefSeqiWP_012472766.1. NC_010830.1.
    YP_001957729.1. NC_010830.1.

    Genome annotation databases

    EnsemblBacteriaiACE06000; ACE06000; Aasi_0599.
    GeneIDi6376447.
    KEGGiaas:Aasi_0599.
    PATRICi21266675. VBICanAmo76781_0684.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001102 Genomic DNA. Translation: ACE06000.1 .
    RefSeqi WP_012472766.1. NC_010830.1.
    YP_001957729.1. NC_010830.1.

    3D structure databases

    ProteinModelPortali B3ERZ8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 452471.Aasi_0599.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACE06000 ; ACE06000 ; Aasi_0599 .
    GeneIDi 6376447.
    KEGGi aas:Aasi_0599.
    PATRICi 21266675. VBICanAmo76781_0684.

    Phylogenomic databases

    eggNOGi COG0018.
    HOGENOMi HOG000247211.
    KOi K01887.
    OMAi PDIAYHI.
    OrthoDBi EOG6JB13C.

    Enzyme and pathway databases

    BioCyci AASI452471:GKEN-656-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001412. aa-tRNA-synth_I_CS.
    IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the amoeba symbiont 'Candidatus Amoebophilus asiaticus' reveals common mechanisms for host cell interaction among amoeba-associated bacteria."
      Schmitz-Esser S., Tischler P., Arnold R., Montanaro J., Wagner M., Rattei T., Horn M.
      J. Bacteriol. 192:1045-1057(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 5a2.

    Entry informationi

    Entry nameiSYR_AMOA5
    AccessioniPrimary (citable) accession number: B3ERZ8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 24, 2009
    Last sequence update: July 22, 2008
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3