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B3EQT2 (Y1179_CHLPB) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0133 protein Cphamn1_1179
Gene names
Ordered Locus Names:Cphamn1_1179
OrganismChlorobium phaeobacteroides (strain BS1) [Complete proteome] [HAMAP]
Taxonomic identifier331678 [NCBI]
Taxonomic lineageBacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length111 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subunit structure

Homodimer By similarity. HAMAP MF_00274

Sequence similarities

Belongs to the UPF0133 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 111111UPF0133 protein Cphamn1_1179 HAMAP MF_00274
PRO_1000114597

Sequences

Sequence LengthMass (Da)Tools
B3EQT2 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 18A6FD762A0F9685

FASTA11111,720
        10         20         30         40         50         60 
MAMPNFNDMM KQLQQAGAKM QDVQKQLEKI TAVGDAGGGM VKATVSGKQK VLSIAIDPEI 

        70         80         90        100        110 
LDDIEMVQDL VVAAVNAALE KAADLAREEL SKAAGGMLGG EDMLKNFNIG Q

« Hide

References

[1]"Complete sequence of Chlorobium phaeobacteroides BS1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Li T., Liu Z., Zhao F. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001101 Genomic DNA. Translation: ACE04113.1.
RefSeqYP_001959594.1. NC_010831.1.

3D structure databases

ProteinModelPortalB3EQT2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3EQT2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6374854.
GenomeReviewsGene locus Cphamn1_1179 in contig CP001101_GR.
KEGGcpb:Cphamn1_1179.
PATRIC21384542. VBIChlPha121022_1271.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG734215.
OMAMADFLGM.
ProtClustDBPRK14621.

Family and domain databases

HAMAPMF_00274. UPF0133.
[Tree]
InterProIPR004401. UPF0133.
[Graphical view]
Gene3DG3DSA:3.30.1310.10. CHP103. 1 hit.
KOK09747.
PfamPF02575. DUF149. 1 hit.
[Graphical view]
PIRSFPIRSF004555. UCP004555. 1 hit.
SUPFAMSSF82607. CHP00103. 1 hit.
TIGRFAMsTIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY1179_CHLPB
AccessionPrimary (citable) accession number: B3EQT2
Entry history
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: July 22, 2008
Last modified: January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

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