Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha amylase catalytic region

Gene

Cphamn1_2394

Organism
Chlorobium phaeobacteroides (strain BS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi98Calcium 1UniRule annotation1
Metal bindingi156Calcium 2UniRule annotation1
Metal bindingi184Calcium 1UniRule annotation1
Metal bindingi190Calcium 1UniRule annotation1
Metal bindingi192Calcium 2UniRule annotation1
Active sitei221NucleophileUniRule annotation1
Metal bindingi225Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei251Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Cphamn1_2394Imported
OrganismiChlorobium phaeobacteroides (strain BS1)Imported
Taxonomic identifieri331678 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
Proteomesi
  • UP000001228 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi331678.Cphamn1_2394.

Structurei

3D structure databases

ProteinModelPortaliB3EPQ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 374AamyInterPro annotationAdd BLAST374

Phylogenomic databases

eggNOGiENOG4105E5K. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000094847.
KOiK01176.
OMAiVLNHKMG.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B3EPQ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQSFHWYSPN DGKFWTEWTE RVPEVSKNGF TALWLPPAYK GMAGTWDVGY
60 70 80 90 100
GVYDLFDCGE FDQKETTRTK YGTKEEYRKC IDAAHDAGVQ IYADVVLNHK
110 120 130 140 150
MGADDRQRVD KVVVVDPHNR NKTIGDCHDR GLWTYFSFPG RGDTYSSMKW
160 170 180 190 200
EWWHFDATKE YGNIYKLKDK QFETHVDSEN VNYDFLMGCD LDFDHEQVRG
210 220 230 240 250
EVHYWGKWYL DSFGMDGFRI DAVKHIRSFF FKHWLDDMRH HAQKELFAVG
260 270 280 290 300
EYWSSDLGRL LRYIKETEGR MHLFDVPLHQ NFHHASKAGA GYDMGSILNN
310 320 330 340 350
SLLKEKPSLA VTIVENHDTQ PLQSLESPVE SWFKPLAYAI ILLRDEGYPC
360 370 380 390 400
VFSADYFGAE YEDKGHKILM DSHRWMIDLF LNARSKCTFG HRRDYFDHRH
410 420 430 440 450
TIGWTFQGDA KHKSMAILMT NGADDTKWME TGRPHRTYRD LTRHIDETVE
460 470
TNEWGWAPFR TRGGKVSVWM EE
Length:472
Mass (Da):55,518
Last modified:July 22, 2008 - v1
Checksum:i27770866CC214919
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001101 Genomic DNA. Translation: ACE05292.1.

Genome annotation databases

EnsemblBacteriaiACE05292; ACE05292; Cphamn1_2394.
KEGGicpb:Cphamn1_2394.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiB3EPQ2_CHLPB
AccessioniPrimary (citable) accession number: B3EPQ2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: June 7, 2017
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported