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B3EP76 (B3EP76_CHLPB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Exodeoxyribonuclease 7 small subunit HAMAP-Rule MF_00337

EC=3.1.11.6 HAMAP-Rule MF_00337
Alternative name(s):
Exodeoxyribonuclease VII small subunit HAMAP-Rule MF_00337
Gene names
Name:xseB HAMAP-Rule MF_00337
Ordered Locus Names:Cphamn1_2311 EMBL ACE05215.1
OrganismChlorobium phaeobacteroides (strain BS1) [Complete proteome] [HAMAP] EMBL ACE05215.1
Taxonomic identifier331678 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium

Protein attributes

Sequence length82 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides By similarity. HAMAP-Rule MF_00337 SAAS SAAS003761

Catalytic activity

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates. HAMAP-Rule MF_00337

Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates.

Subunit structure

Heterooligomer composed of large and small subunits By similarity. HAMAP-Rule MF_00337 SAAS SAAS003761

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00337 SAAS SAAS003761.

Sequence similarities

Belongs to the XseB family. HAMAP-Rule MF_00337

Sequences

Sequence LengthMass (Da)Tools
B3EP76 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 03FFC45B59E905E9

FASTA829,289
        10         20         30         40         50         60 
MSQKKATIEE LIARLEEITG EMEHPDTGID TSIKLYEEGL KIAAICRKRL QDARQKIEII 

        70         80 
NPETSSGQEP EKKEDYGLFN AP 

« Hide

References

[1]"Complete sequence of Chlorobium phaeobacteroides BS1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Li T., Liu Z., Zhao F. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BS1 EMBL ACE05215.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001101 Genomic DNA. Translation: ACE05215.1.
RefSeqYP_001960696.1. NC_010831.1.

3D structure databases

ProteinModelPortalB3EP76.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING331678.Cphamn1_2311.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACE05215; ACE05215; Cphamn1_2311.
GeneID6376006.
KEGGcpb:Cphamn1_2311.
PATRIC21387067. VBIChlPha121022_2514.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG280514.
HOGENOMHOG000228798.
KOK03602.
OMANIENPET.
OrthoDBEOG69KV31.
ProtClustDBCLSK2339424.

Enzyme and pathway databases

BioCycCPHA331678:GHME-2364-MONOMER.

Family and domain databases

Gene3D1.10.287.1040. 1 hit.
HAMAPMF_00337. Exonuc_7_S.
InterProIPR003761. Exonuc_VII_S.
[Graphical view]
PfamPF02609. Exonuc_VII_S. 1 hit.
[Graphical view]
PIRSFPIRSF006488. Exonuc_VII_S. 1 hit.
ProDomPD028235. Exonuc_VII_S. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Entry information

Entry nameB3EP76_CHLPB
AccessionPrimary (citable) accession number: B3EP76
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: April 16, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)