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B3EP76

- B3EP76_CHLPB

UniProt

B3EP76 - B3EP76_CHLPB

Protein

Exodeoxyribonuclease 7 small subunit

Gene

xseB

Organism
Chlorobium phaeobacteroides (strain BS1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotationSAAS annotation

    Catalytic activityi

    Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation
    Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates.SAAS annotation

    GO - Molecular functioni

    1. exodeoxyribonuclease VII activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    ExonucleaseUniRule annotationSAAS annotationImported, Hydrolase, Nuclease

    Enzyme and pathway databases

    BioCyciCPHA331678:GHME-2364-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Exodeoxyribonuclease 7 small subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
    Alternative name(s):
    Exodeoxyribonuclease VII small subunitUniRule annotation
    Gene namesi
    Name:xseBUniRule annotation
    Ordered Locus Names:Cphamn1_2311Imported
    OrganismiChlorobium phaeobacteroides (strain BS1)Imported
    Taxonomic identifieri331678 [NCBI]
    Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
    ProteomesiUP000001228: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. exodeoxyribonuclease VII complex Source: InterPro

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Heterooligomer composed of large and small subunits.UniRule annotationSAAS annotation

    Protein-protein interaction databases

    STRINGi331678.Cphamn1_2311.

    Structurei

    3D structure databases

    ProteinModelPortaliB3EP76.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the XseB family.UniRule annotation

    Phylogenomic databases

    eggNOGiNOG280514.
    HOGENOMiHOG000228798.
    KOiK03602.
    OMAiNIENPET.
    OrthoDBiEOG69KV31.

    Family and domain databases

    Gene3Di1.10.287.1040. 1 hit.
    HAMAPiMF_00337. Exonuc_7_S.
    InterProiIPR003761. Exonuc_VII_S.
    [Graphical view]
    PfamiPF02609. Exonuc_VII_S. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006488. Exonuc_VII_S. 1 hit.
    ProDomiPD028235. Exonuc_VII_S. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    B3EP76-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQKKATIEE LIARLEEITG EMEHPDTGID TSIKLYEEGL KIAAICRKRL   50
    QDARQKIEII NPETSSGQEP EKKEDYGLFN AP 82
    Length:82
    Mass (Da):9,289
    Last modified:July 22, 2008 - v1
    Checksum:i03FFC45B59E905E9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001101 Genomic DNA. Translation: ACE05215.1.
    RefSeqiWP_012475677.1. NC_010831.1.
    YP_001960696.1. NC_010831.1.

    Genome annotation databases

    EnsemblBacteriaiACE05215; ACE05215; Cphamn1_2311.
    GeneIDi6376006.
    KEGGicpb:Cphamn1_2311.
    PATRICi21387067. VBIChlPha121022_2514.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001101 Genomic DNA. Translation: ACE05215.1 .
    RefSeqi WP_012475677.1. NC_010831.1.
    YP_001960696.1. NC_010831.1.

    3D structure databases

    ProteinModelPortali B3EP76.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 331678.Cphamn1_2311.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACE05215 ; ACE05215 ; Cphamn1_2311 .
    GeneIDi 6376006.
    KEGGi cpb:Cphamn1_2311.
    PATRICi 21387067. VBIChlPha121022_2514.

    Phylogenomic databases

    eggNOGi NOG280514.
    HOGENOMi HOG000228798.
    KOi K03602.
    OMAi NIENPET.
    OrthoDBi EOG69KV31.

    Enzyme and pathway databases

    BioCyci CPHA331678:GHME-2364-MONOMER.

    Family and domain databases

    Gene3Di 1.10.287.1040. 1 hit.
    HAMAPi MF_00337. Exonuc_7_S.
    InterProi IPR003761. Exonuc_VII_S.
    [Graphical view ]
    Pfami PF02609. Exonuc_VII_S. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006488. Exonuc_VII_S. 1 hit.
    ProDomi PD028235. Exonuc_VII_S. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BS1Imported.

    Entry informationi

    Entry nameiB3EP76_CHLPB
    AccessioniPrimary (citable) accession number: B3EP76
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 22, 2008
    Last sequence update: July 22, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3