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B3EJ57 (B3EJ57_CHLPB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Argininosuccinate lyase HAMAP MF_00006
Short name=ASAL HAMAP MF_00006
EC=4.3.2.1 HAMAP MF_00006
Alternative name(s):
Arginosuccinase HAMAP MF_00006
Gene names
Name:argH HAMAP MF_00006
Ordered Locus Names:Cphamn1_1327
OrganismChlorobium phaeobacteroides (strain BS1) [Complete proteome] [HAMAP]
Taxonomic identifier331678 [NCBI]
Taxonomic lineageBacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2-(N(omega)-L-arginino)succinate = fumarate + L-arginine. HAMAP MF_00006

Pathway

Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. HAMAP MF_00006

Subcellular location

Cytoplasm By similarity HAMAP MF_00006.

Sequence similarities

Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. HAMAP MF_00006

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Arginine biosynthesis HAMAP MF_00006
   Cellular componentCytoplasm HAMAP MF_00006
   Molecular functionLyase HAMAP MF_00006 EMBL ACE04257.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processarginine biosynthetic process via ornithine

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionargininosuccinate lyase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3EJ57 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 87B9FDC56BF4302B

FASTA46652,521
        10         20         30         40         50         60 
MDKNKSTGKE LLWQSRFSEP FDREALLFSS SVDVDKVLYQ EDIKGSIAHV TMLSEEAIIP 

        70         80         90        100        110        120 
VEEARLIIEG LEDIEQEISS GALIPDWEDE DIHTVIENRL KEKIGPIAGK MHSGRSRNDQ 

       130        140        150        160        170        180 
VATDTRLYLK KVIGELGEAL DGLKTLLVEK ADIYRNTIIF GYTHLQRAQP VSAGHYYLAY 

       190        200        210        220        230        240 
FNMFLRDGER LKDLFKRVDI SPLGAAAFAG STLPINAKRS MELLDFSDLF QNSTDAVSDR 

       250        260        270        280        290        300 
DIIIEFISAC SIIMMHLSRF CEDLILWSSS EFNYIEISDA FSTGSSIMPQ KKNADIAELV 

       310        320        330        340        350        360 
RGKTGRVYGN LMSILTIMKS LPLSYNRDMQ EDKPPLFDSA GSTVSSVRIF TKMLAHTRLN 

       370        380        390        400        410        420 
EKRLKTLTGE DLSLATEIAE YLVRKNLPFR EAHRITGKIV SHAIEKRTSL PKISLEEYRG 

       430        440        450        460 
FCDLFNEDLY DALTPEASIN SKHSHGSTSF ASVEQQITIA RGKLRK

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References

[1]"Complete sequence of Chlorobium phaeobacteroides BS1."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Li T., Liu Z., Zhao F. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001101 Genomic DNA. Translation: ACE04257.1.
RefSeqYP_001959738.1. NC_010831.1.

3D structure databases

ProteinModelPortalB3EJ57.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3EJ57.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6375005.
GenomeReviewsGene locus Cphamn1_1327 in contig CP001101_GR.
KEGGcpb:Cphamn1_1327.
PATRIC21384878. VBIChlPha121022_1436.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG539632.
OMAEDIHTVI.
ProtClustDBPRK00855.

Family and domain databases

HAMAPMF_00006. Arg_succ_lyase.
[Tree]
InterProIPR009049. Argininosuccinate_lyase.
IPR003031. D_crystallin.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR024083. L-Aspartase-like_N.
IPR022761. Lyase1_N.
[Graphical view]
Gene3DG3DSA:1.10.275.10. G3DSA:1.10.275.10. 2 hits.
KOK01755.
PANTHERPTHR11444:SF3. argH. 1 hit.
PfamPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00838. ArgH. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3EJ57_CHLPB
AccessionPrimary (citable) accession number: B3EJ57
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info