B3EIC4 (Y875_CHLL2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0133 protein Clim_0875

Gene names

Ordered Locus Names:

Clim_0875

Organism

Chlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]

Taxonomic identifier

290315 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length	111 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Homodimer By similarity. HAMAP MF_00274
Sequence similarities	Belongs to the UPF0133 family.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 111	111	UPF0133 protein Clim_0875 HAMAP MF_00274		PRO_1000114595

Sequences

	Sequence		Length	Mass (Da)
	B3EIC4 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: AE602C4A7236B1EB	FASTA	111	11,749
	10 20 30 40 50 60 MGMPNLGDMM KQIQKAGEKM QDVQNQLEKL VAHGESGGGM VKVSVSGKQK LLSLRIDPEI 70 80 90 100 110 MDDAEMVQDL VIAAVNNALD ASAALAQEEI SKAAGGMINP ADILKNMNLG K

References

[1]

"Complete sequence of Chlorobium limicola DSM 245." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. , Overmann J., Bryant D.A., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001097 Genomic DNA. Translation: ACD89954.1.
RefSeq	YP_001942933.1. NC_010803.1.
3D structure databases
ProteinModelPortal	B3EIC4.
ModBase	Search...
Protein-protein interaction databases
STRING	B3EIC4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6354110.
GenomeReviews	Gene locus Clim_0875 in contig CP001097_GR.
KEGG	cli:Clim_0875.
PATRIC	21373789. VBIChlLim118737_0935.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG734215.
OMA	MADFLGM.
ProtClustDB	PRK14621.
Family and domain databases
HAMAP	MF_00274. UPF0133. [Tree]
InterPro	IPR004401. UPF0133. [Graphical view]
Gene3D	G3DSA:3.30.1310.10. CHP103. 1 hit.
KO	K09747.
Pfam	PF02575. DUF149. 1 hit. [Graphical view]
PIRSF	PIRSF004555. UCP004555. 1 hit.
SUPFAM	SSF82607. CHP00103. 1 hit.
TIGRFAMs	TIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Y875_CHLL2

Accession

Primary (citable) accession number: B3EIC4

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 24, 2009
Last sequence update:	July 22, 2008
Last modified:	January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program