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B3EGV0 (GLGA_CHLL2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Clim_2189
OrganismChlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]
Taxonomic identifier290315 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 489489Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126057

Sites

Binding site201ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B3EGV0 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: DA62DC9B5716DA0C

FASTA48955,165
        10         20         30         40         50         60 
MARRNFKVLY VSGEVSPFVR ISALADFMAS FPQALEEEGF EARIMMPKYG TINDRKFRLH 

        70         80         90        100        110        120 
DVLRLSDIEV NLRDKTELLH VKVTALPSSK IQTYFLYNEK YFKRNGLFTD VHNGGDLKGN 

       130        140        150        160        170        180 
TEKVIFFNVG VLETLQRLGW KPDIIHCHDW YAGLLPLLLK TVYASNSFFS DVKTVLTVHN 

       190        200        210        220        230        240 
VYRQGILPFK VFQKLLPEEV SSALYRAGDN VNMLYTGAEH ADLLTTTSRL YADEIVGNGS 

       250        260        270        280        290        300 
DTYGLGTVVE ERKSTFHGIL NGIDTRQWNP STDKLIKKRY AADRLEGKLD NKKALLDEAG 

       310        320        330        340        350        360 
LPFTEGRPLA GIIIGFDAFQ GAELLKESLV KLVELDMQLI ICGSGDKEYE KYFQDFAAEY 

       370        380        390        400        410        420 
PEQVSVRTDY ADTLLHLAIA GFDMLLMPGR IESCGMLQLF AMSYGTIPVA YAGGGIVETI 

       430        440        450        460        470        480 
DAVTDKSGSG FLFYDYTADA FAGKVQEALD LYHDEERWLQ LVLEAMGKDF SWKNSAGEYD 


QLYRKLLEE 

« Hide

References

[1]"Complete sequence of Chlorobium limicola DSM 245."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001097 Genomic DNA. Translation: ACD91213.1.
RefSeqYP_001944192.1. NC_010803.1.

3D structure databases

ProteinModelPortalB3EGV0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290315.Clim_2189.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD91213; ACD91213; Clim_2189.
GeneID6355983.
KEGGcli:Clim_2189.
PATRIC21376679. VBIChlLim118737_2359.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMATRQWNPS.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycCLIM290315:GHUH-2238-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_CHLL2
AccessionPrimary (citable) accession number: B3EGV0
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 22, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways