Reviewed, UniProtKB/Swiss-Prot B3EGV0 (GLGA_CHLL2)

Names and origin

Protein names

Recommended name:
    Glycogen synthase
    EC=2.4.1.21
Alternative name(s):
    Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	Clim_2189

Organism

Chlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]

Taxonomic identifier

290315 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length	489 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity.
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 489	489	Glycogen synthase HAMAP MF_00484		PRO_1000126057
Sites
	Binding site	20	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	B3EGV0-1 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: DA62DC9B5716DA0C	FASTA	489	55,165
	10 20 30 40 50 60 MARRNFKVLY VSGEVSPFVR ISALADFMAS FPQALEEEGF EARIMMPKYG TINDRKFRLH 70 80 90 100 110 120 DVLRLSDIEV NLRDKTELLH VKVTALPSSK IQTYFLYNEK YFKRNGLFTD VHNGGDLKGN 130 140 150 160 170 180 TEKVIFFNVG VLETLQRLGW KPDIIHCHDW YAGLLPLLLK TVYASNSFFS DVKTVLTVHN 190 200 210 220 230 240 VYRQGILPFK VFQKLLPEEV SSALYRAGDN VNMLYTGAEH ADLLTTTSRL YADEIVGNGS 250 260 270 280 290 300 DTYGLGTVVE ERKSTFHGIL NGIDTRQWNP STDKLIKKRY AADRLEGKLD NKKALLDEAG 310 320 330 340 350 360 LPFTEGRPLA GIIIGFDAFQ GAELLKESLV KLVELDMQLI ICGSGDKEYE KYFQDFAAEY 370 380 390 400 410 420 PEQVSVRTDY ADTLLHLAIA GFDMLLMPGR IESCGMLQLF AMSYGTIPVA YAGGGIVETI 430 440 450 460 470 480 DAVTDKSGSG FLFYDYTADA FAGKVQEALD LYHDEERWLQ LVLEAMGKDF SWKNSAGEYD QLYRKLLEE

References

[1]

"Complete sequence of Chlorobium limicola DSM 245." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. , Overmann J., Bryant D.A., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP001097 Genomic DNA. Translation: ACD91213.1.
RefSeq	YP_001944192.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	6355983.
GenomeReviews	Gene locus Clim_2189 in contig CP001097_GR.
KEGG	cli:Clim_2189.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	YQGPWRW.
Family and domain databases
HAMAP	MF_00484. [Tree]
InterPro	IPR011835. GlgA. IPR001296. Glyco_trans_1. IPR013534. Glyco_transf_5. [Graphical view]
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. glgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_CHLL2

Accession

Primary (citable) accession number: B3EGV0

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	July 22, 2008
Last modified:	November 3, 2009
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)