B3EGJ4 (B3EGJ4_CHLL2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent EMBL ACD89631.1
EC=1.17.4.1 EMBL ACD89631.1

Gene names

Ordered Locus Names:

Clim_0539

Organism

Chlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]

Taxonomic identifier

290315 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length	1146 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ACD89631.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro cobalt ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro ribonucleoside-diphosphate reductase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3EGJ4 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 9E9E7AD99140B48D	FASTA	1,146	127,300
	10 20 30 40 50 60 MFTSPGENVY DRFEYTLRSS VLRNTDGSKV FEMNDIEVPK HWSQVAADIL AQKYFRKTGV 70 80 90 100 110 120 PRRDAEGKVL LDEHGRPVTG SERSIKEVVH RLAGCWREWG ENNRYFDTPD DARAFYDEVA 130 140 150 160 170 180 YMLLRQMGAP NSPQWFNTGL NFAYGIDGPA QGHFYVDPAT QEVRESEDAY SRPQAHACFI 190 200 210 220 230 240 QSVNDDLVNE GGIFDLAVRE ARVFKFGSGS GTNYSNLRSS GEKLSGGGSS SGLMSFLKIF 250 260 270 280 290 300 DSAAGAIKSG GTTRRAAKMV IVDIDHPDVE RFIEWKAREE DKVAALVAGS RICSRFLKAI 310 320 330 340 350 360 VDEAIANGSD RSENLNLQLL IKNALARAVP MNYIVRVLAL VDQGYTTLDF EEYDTHYESE 370 380 390 400 410 420 AYQTVGGQNS NNTVRVTNAF MKAVENDDMW ALRERTTDKT ARAVRARDLW EKVLMSAWKC 430 440 450 460 470 480 ADPGLQFDTT INEWHTCPQS GRINASNPCS EYMFLDDTAC NLASLNLIHF VDESTGKIRV 490 500 510 520 530 540 RELLHASALW TVVLEISVLM AHFPSKDIAR LSYEYRTLGL GFANLGTVLM VLGIPYDSPK 550 560 570 580 590 600 ALALAGAISA LMTGQAYVTS AEMAKDLGAF AGYAANSKDM LRVIRNHRRA AHNLSEEEYE 610 620 630 640 650 660 GLSVKPRGID SEYCPTELFE AAGKIWDEAL QKGKKHGFRN AQVSVIAPTG TIGLVMDCDT 670 680 690 700 710 720 TGVEPEFAIV KFKKLAGGGY FKIVNQSVHK ALERLGYTSA QIDDIEKYCK GHGTLSGCPT 730 740 750 760 770 780 ISRQWLKSRG FTDEKIEQVE LQLETVFDIR FAFNKWILGE EFCLSLGFTD EQLNSPDFDM 790 800 810 820 830 840 LQALGATGQD AEAANDYICG TMTIEGAPHL KHEHLPVFDC ASRCGKKGER YITHMAHVHM 850 860 870 880 890 900 MSAVQPFISG AISKTVNMPG TATTVEIGDV YRSAWQHMVK AITIYRDGSK LSQPLNISSY 910 920 930 940 950 960 RDLDEIIMLG TEETLDETKG PREVQERIIE RVFHRSERRL LPKRRKGYIR EAYVGGHKVF 970 980 990 1000 1010 1020 LRTGEYEDGS LGEVFIDMYK EGASFKGLLN CFAVLASKAL QYGMPLEELV DSFTFTRFEP 1030 1040 1050 1060 1070 1080 AGTVQGHNAI KNSTSILDYV FRSIGYDYLG RKDFVHVKAV DEVPEGGDIE EKAKNNGSAV 1090 1100 1110 1120 1130 1140 HEPQLSHAAG QQHVTSEYAA SLKTQVLQAK VQGYTGEQCE NCGSMRVKQN GTCKVCEDCG TTTGCS

References

[1]

"Complete sequence of Chlorobium limicola DSM 245." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. , Overmann J., Bryant D.A., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001097 Genomic DNA. Translation: ACD89631.1.
RefSeq	YP_001942610.1. NC_010803.1.
3D structure databases
ProteinModelPortal	B3EGJ4.
ModBase	Search...
Protein-protein interaction databases
STRING	B3EGJ4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6354890.
GenomeReviews	Gene locus Clim_0539 in contig CP001097_GR.
KEGG	cli:Clim_0539.
PATRIC	21373079. VBIChlLim118737_0582.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG414188.
OMA	FLWRSVP.
ProtClustDB	PRK07562.
Family and domain databases
InterPro	IPR002876. DUF28. IPR017856. Integrase_Zn-bd_dom-like_N. IPR013344. RDP_Rdtase_AdoCbl-dep. IPR000788. Ribncl_red_lg_C. IPR013678. Ribonuc_red_2_N. IPR024434. TSCPD_dom. [Graphical view]
Gene3D	G3DSA:1.10.10.200. Intgrase_N_Zn_bd. 1 hit.
KO	K00525.
Pfam	PF08471. Ribonuc_red_2_N. 1 hit. PF02867. Ribonuc_red_lgC. 2 hits. PF12637. TSCPD. 1 hit. [Graphical view]
PRINTS	PR01183. RIBORDTASEM1.
SUPFAM	SSF75625. DUF28. 1 hit.
TIGRFAMs	TIGR02504. NrdJ_Z. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3EGJ4_CHLL2

Accession

Primary (citable) accession number: B3EGJ4

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)