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B3EFP0 (B3EFP0_CHLL2) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ACD91002.1
Gene names
Ordered Locus Names:Clim_1970 EMBL ACD91002.1
OrganismChlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP] EMBL ACD91002.1
Taxonomic identifier290315 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium

Protein attributes

Sequence length433 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACD91002.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3EFP0 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 9BE3FBBF4F03AD0C

FASTA43347,751
        10         20         30         40         50         60 
MNTEDIKGFF ASPEQLDMAD YLILDYYLEC VGDIETALAH FCSEQSTAQW RRVGFDEDFR 

        70         80         90        100        110        120 
PLYAARVIHL TVEGELPELS YPVKHSETGP VHACRVTIAH PHRNFGPKLP NLLSAVCGEG 

       130        140        150        160        170        180 
AFFTPGVPVV KLLDITFPES YLNAFDGPKF GIEGIRDILQ AYDRPIFFGV VKPNIGLKPS 

       190        200        210        220        230        240 
CFAEIAYQSW LGGLDIAKDD EMLADVDWST LEERSRELGA ARMRAEKETG EPKIYLANVT 

       250        260        270        280        290        300 
DEVDRLIEQH DIAVSNGANA LLINALPVGL SAVRMLAKHT KVPLIGHFPF IAAFSRLEKY 

       310        320        330        340        350        360 
GVHSRVMTKL QRLAGLDSII MPGFGSRMMT PEEEVMDNIR ECLQDFGHIR TSLPVPGGSD 

       370        380        390        400        410        420 
SALTLETVYR KVGSFDFGFV PGRGIFGHPM GPKAGAASIR QAWEAIRQGV PIEIYAQGRP 

       430 
ELQAMIDGAA AKQ 

« Hide

References

[1]"Complete sequence of Chlorobium limicola DSM 245."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001097 Genomic DNA. Translation: ACD91002.1.
RefSeqYP_001943981.1. NC_010803.1.

3D structure databases

ProteinModelPortalB3EFP0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290315.Clim_1970.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD91002; ACD91002; Clim_1970.
GeneID6355474.
KEGGcli:Clim_1970.
PATRIC21376197. VBIChlLim118737_2119.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMALAHFCSE.
OrthoDBEOG62K1SK.
ProtClustDBCLSK637929.

Enzyme and pathway databases

BioCycCLIM290315:GHUH-2018-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3EFP0_CHLL2
AccessionPrimary (citable) accession number: B3EFP0
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: January 22, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)