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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Clim_1970

Organism
Chlorobium limicola (strain DSM 245 / NBRC 103803)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciCLIM290315:GHUH-2018-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Clim_1970Imported
OrganismiChlorobium limicola (strain DSM 245 / NBRC 103803)Imported
Taxonomic identifieri290315 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
ProteomesiUP000008841: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290315.Clim_1970.

Structurei

3D structure databases

ProteinModelPortaliB3EFP0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

B3EFP0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNTEDIKGFF ASPEQLDMAD YLILDYYLEC VGDIETALAH FCSEQSTAQW
60 70 80 90 100
RRVGFDEDFR PLYAARVIHL TVEGELPELS YPVKHSETGP VHACRVTIAH
110 120 130 140 150
PHRNFGPKLP NLLSAVCGEG AFFTPGVPVV KLLDITFPES YLNAFDGPKF
160 170 180 190 200
GIEGIRDILQ AYDRPIFFGV VKPNIGLKPS CFAEIAYQSW LGGLDIAKDD
210 220 230 240 250
EMLADVDWST LEERSRELGA ARMRAEKETG EPKIYLANVT DEVDRLIEQH
260 270 280 290 300
DIAVSNGANA LLINALPVGL SAVRMLAKHT KVPLIGHFPF IAAFSRLEKY
310 320 330 340 350
GVHSRVMTKL QRLAGLDSII MPGFGSRMMT PEEEVMDNIR ECLQDFGHIR
360 370 380 390 400
TSLPVPGGSD SALTLETVYR KVGSFDFGFV PGRGIFGHPM GPKAGAASIR
410 420 430
QAWEAIRQGV PIEIYAQGRP ELQAMIDGAA AKQ
Length:433
Mass (Da):47,751
Last modified:July 22, 2008 - v1
Checksum:i9BE3FBBF4F03AD0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA. Translation: ACD91002.1.
RefSeqiYP_001943981.1. NC_010803.1.

Genome annotation databases

EnsemblBacteriaiACD91002; ACD91002; Clim_1970.
GeneIDi6355474.
KEGGicli:Clim_1970.
PATRICi21376197. VBIChlLim118737_2119.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA. Translation: ACD91002.1.
RefSeqiYP_001943981.1. NC_010803.1.

3D structure databases

ProteinModelPortaliB3EFP0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290315.Clim_1970.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD91002; ACD91002; Clim_1970.
GeneIDi6355474.
KEGGicli:Clim_1970.
PATRICi21376197. VBIChlLim118737_2119.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciCLIM290315:GHUH-2018-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 245 / NBRC 103803Imported.

Entry informationi

Entry nameiB3EFP0_CHLL2
AccessioniPrimary (citable) accession number: B3EFP0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: February 4, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.