B3EFF6 (B3EFF6_CHLL2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258

Gene names

Name:	murI HAMAP MF_00258
Ordered Locus Names:	Clim_0346

Organism

Chlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]

Taxonomic identifier

290315 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length	274 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942
Catalytic activity	L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942
Pathway	Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942
Sequence similarities	Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Ontologies

Keywords
Biological process	Cell shape Cell wall biogenesis/degradation HAMAP MF_00258 SAAS SAAS015942 Peptidoglycan synthesis HAMAP MF_00258 SAAS SAAS015942
Molecular function	Isomerase HAMAP MF_00258 SAAS SAAS015942 EMBL ACD89439.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic process Inferred from electronic annotation. Source: HAMAP regulation of cell shape Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	glutamate racemase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3EFF6 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: C56FB975790C7466	FASTA	274	29,829
	10 20 30 40 50 60 MQTHQHKTAP ESPIGIFDSG VGGLTVVRAM QAILPAERLI YFGDTARVPY GSKSQVTIRK 70 80 90 100 110 120 YAHDDTAILM RYQPKMIIVA CNTVSALALD VVEKTCGNIP VIGVLEAGAQ LAVSRSEHKR 130 140 150 160 170 180 IGVIGTQATV CSNAYACAIN MLDSEVTVHS KACPLFVPLA EEGFTDHPAT RLIAAEYLRA 190 200 210 220 230 240 FDGHDIDTLV LGCTHYPILR SMIEQTIGPD IRIIDSAEAV ACRAKELLTE TGMLNTTSET 250 260 270 ENPHLLVSDL PQKFSMLYRL FMGSEMPDVE LVEV

References

[1]

"Complete sequence of Chlorobium limicola DSM 245." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. , Overmann J., Bryant D.A., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001097 Genomic DNA. Translation: ACD89439.1.
RefSeq	YP_001942418.1. NC_010803.1.
3D structure databases
ProteinModelPortal	B3EFF6.
ModBase	Search...
Protein-protein interaction databases
STRING	B3EFF6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6354340.
GenomeReviews	Gene locus Clim_0346 in contig CP001097_GR.
KEGG	cli:Clim_0346.
PATRIC	21372643. VBIChlLim118737_0371.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG645102.
OMA	PQEDTIY.
ProtClustDB	PRK00865.
Family and domain databases
HAMAP	MF_00258. Glu_racemase. [Tree]
InterPro	IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR018187. Asp/Glu_racemase_AS. IPR004391. Glu_race. [Graphical view]
Gene3D	G3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KO	K01776.
PANTHER	PTHR21198. PTHR21198. 1 hit.
Pfam	PF01177. Asp_Glu_race. 1 hit. [Graphical view]
SUPFAM	SSF53681. Asp/Glu_race. 2 hits.
TIGRFAMs	TIGR00067. Glut_race. 1 hit.
PROSITE	PS00924. ASP_GLU_RACEMASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3EFF6_CHLL2

Accession

Primary (citable) accession number: B3EFF6

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)