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B3EF09 (B3EF09_CHLL2) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Clim_1832 EMBL ACD90871.1
OrganismChlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP] EMBL ACD90871.1
Taxonomic identifier290315 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium

Protein attributes

Sequence length543 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B3EF09 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: C662D78B1538670E

FASTA54361,652
        10         20         30         40         50         60 
MKNHKDLTIL FVDDEPDILS SLNRFLRREP YKKLFAENGR KALEIFDSVT VDIIISDLRM 

        70         80         90        100        110        120 
PEMNGLELIN EVKKRRPESV RMILSGSQDI DQIIESINTG EVFRFIPKPV EPGAFKKILN 

       130        140        150        160        170        180 
DAIDYYCLKN EREELFKELS IKNQELTKAN DALKILTGEL ERSEEQFRSM NDAAHDAVFM 

       190        200        210        220        230        240 
LNQEGAIIYR NAAAETIFGF NRNQYPNQPF DELLANETTQ IDLKRFCKNP SEKNADKVIQ 

       250        260        270        280        290        300 
IEGLKINGTT LPIEISKGCV HIDSLPHTVV IARDITSRVE EERSRQRYTN LQRDLESQIE 

       310        320        330        340        350        360 
KKLLQSPVPE SLQGASLSRL MLPSGHLDGD FIDFIVYDRS HIDILIGDVM GHGIQSALVG 

       370        380        390        400        410        420 
AGIKSLFLKV LAEQQSDTGE LPSLQDILTA VHDRCIHELI ELGTYTTLLF IRLDLSNRKF 

       430        440        450        460        470        480 
SIVDCGHTPA IHFHSRTGTV RQLKGENLPI GMIEQQQYSE STYPIEENDI LVLYSDGITE 

       490        500        510        520        530        540 
SRSPNATMFG IDRLAEIIKK HHELPADNLV STIRTLLSDF SGRATFDDDV TCLVIRIEQT 


SRR 

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References

[1]"Complete sequence of Chlorobium limicola DSM 245."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001097 Genomic DNA. Translation: ACD90871.1.
RefSeqYP_001943850.1. NC_010803.1.

3D structure databases

ProteinModelPortalB3EF09.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290315.Clim_1832.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD90871; ACD90871; Clim_1832.
GeneID6355173.
KEGGcli:Clim_1832.
PATRIC21375883. VBIChlLim118737_1963.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
HOGENOMHOG000153161.
OMACCYPARE.
OrthoDBEOG6S267M.
ProtClustDBCLSK770372.

Enzyme and pathway databases

BioCycCLIM290315:GHUH-1879-MONOMER.

Family and domain databases

InterProIPR011006. CheY-like_superfamily.
IPR000014. PAS.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF13426. PAS_9. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3EF09_CHLL2
AccessionPrimary (citable) accession number: B3EF09
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: April 16, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)