B3EF09 (B3EF09_CHLL2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative PAS/PAC sensor protein EMBL ACD90871.1

Gene names

Ordered Locus Names:

Clim_1832

Organism

Chlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP] EMBL ACD90871.1

Taxonomic identifier

290315 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium › Chlorobium limicola

Protein attributes

Sequence length	543 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC metabolic process Inferred from electronic annotation. Source: GOC regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3EF09 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: C662D78B1538670E	FASTA	543	61,652
	10 20 30 40 50 60 MKNHKDLTIL FVDDEPDILS SLNRFLRREP YKKLFAENGR KALEIFDSVT VDIIISDLRM 70 80 90 100 110 120 PEMNGLELIN EVKKRRPESV RMILSGSQDI DQIIESINTG EVFRFIPKPV EPGAFKKILN 130 140 150 160 170 180 DAIDYYCLKN EREELFKELS IKNQELTKAN DALKILTGEL ERSEEQFRSM NDAAHDAVFM 190 200 210 220 230 240 LNQEGAIIYR NAAAETIFGF NRNQYPNQPF DELLANETTQ IDLKRFCKNP SEKNADKVIQ 250 260 270 280 290 300 IEGLKINGTT LPIEISKGCV HIDSLPHTVV IARDITSRVE EERSRQRYTN LQRDLESQIE 310 320 330 340 350 360 KKLLQSPVPE SLQGASLSRL MLPSGHLDGD FIDFIVYDRS HIDILIGDVM GHGIQSALVG 370 380 390 400 410 420 AGIKSLFLKV LAEQQSDTGE LPSLQDILTA VHDRCIHELI ELGTYTTLLF IRLDLSNRKF 430 440 450 460 470 480 SIVDCGHTPA IHFHSRTGTV RQLKGENLPI GMIEQQQYSE STYPIEENDI LVLYSDGITE 490 500 510 520 530 540 SRSPNATMFG IDRLAEIIKK HHELPADNLV STIRTLLSDF SGRATFDDDV TCLVIRIEQT SRR

References

[1]

"Complete sequence of Chlorobium limicola DSM 245." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. , Overmann J., Bryant D.A., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001097 Genomic DNA. Translation: ACD90871.1.
RefSeq	YP_001943850.1. NC_010803.1.
3D structure databases
ProteinModelPortal	B3EF09.
ModBase	Search...
Protein-protein interaction databases
STRING	290315.Clim_1832.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD90871; ACD90871; Clim_1832.
GeneID	6355173.
KEGG	cli:Clim_1832.
PATRIC	21375883. VBIChlLim118737_1963.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2208.
HOGENOM	HOG000153161.
OMA	CYPAREV.
ProtClustDB	CLSK770372.
Enzyme and pathway databases
BioCyc	CLIM290315:GHUH-1879-MONOMER.
Family and domain databases
InterPro	IPR011006. CheY-like_superfamily. IPR000014. PAS. IPR001932. PP2C-like. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Pfam	PF00072. Response_reg. 1 hit. PF07228. SpoIIE. 1 hit. [Graphical view]
SMART	SM00091. PAS. 1 hit. SM00331. PP2C_SIG. 1 hit. SM00332. PP2Cc. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF52172. CheY_like. 1 hit. SSF81606. PP2C-related. 1 hit. SSF55785. SSF55785. 1 hit.
TIGRFAMs	TIGR00229. sensory_box. 1 hit.
PROSITE	PS50112. PAS. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3EF09_CHLL2

Accession

Primary (citable) accession number: B3EF09

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	May 29, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)