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Protein
Submitted name:

Putative PAS/PAC sensor protein

Gene

Clim_1832

Organism
Chlorobium limicola (strain DSM 245 / NBRC 103803)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. signal transducer activity Source: InterPro

GO - Biological processi

  1. phosphorelay signal transduction system Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCLIM290315:GHUH-1879-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative PAS/PAC sensor proteinImported
Gene namesi
Ordered Locus Names:Clim_1832Imported
OrganismiChlorobium limicola (strain DSM 245 / NBRC 103803)Imported
Taxonomic identifieri290315 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
ProteomesiUP000008841 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290315.Clim_1832.

Structurei

3D structure databases

ProteinModelPortaliB3EF09.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000153161.
OMAiCCYPARE.
OrthoDBiEOG6S267M.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR000014. PAS.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF13426. PAS_9. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3EF09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNHKDLTIL FVDDEPDILS SLNRFLRREP YKKLFAENGR KALEIFDSVT
60 70 80 90 100
VDIIISDLRM PEMNGLELIN EVKKRRPESV RMILSGSQDI DQIIESINTG
110 120 130 140 150
EVFRFIPKPV EPGAFKKILN DAIDYYCLKN EREELFKELS IKNQELTKAN
160 170 180 190 200
DALKILTGEL ERSEEQFRSM NDAAHDAVFM LNQEGAIIYR NAAAETIFGF
210 220 230 240 250
NRNQYPNQPF DELLANETTQ IDLKRFCKNP SEKNADKVIQ IEGLKINGTT
260 270 280 290 300
LPIEISKGCV HIDSLPHTVV IARDITSRVE EERSRQRYTN LQRDLESQIE
310 320 330 340 350
KKLLQSPVPE SLQGASLSRL MLPSGHLDGD FIDFIVYDRS HIDILIGDVM
360 370 380 390 400
GHGIQSALVG AGIKSLFLKV LAEQQSDTGE LPSLQDILTA VHDRCIHELI
410 420 430 440 450
ELGTYTTLLF IRLDLSNRKF SIVDCGHTPA IHFHSRTGTV RQLKGENLPI
460 470 480 490 500
GMIEQQQYSE STYPIEENDI LVLYSDGITE SRSPNATMFG IDRLAEIIKK
510 520 530 540
HHELPADNLV STIRTLLSDF SGRATFDDDV TCLVIRIEQT SRR
Length:543
Mass (Da):61,652
Last modified:July 22, 2008 - v1
Checksum:iC662D78B1538670E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA. Translation: ACD90871.1.
RefSeqiYP_001943850.1. NC_010803.1.

Genome annotation databases

EnsemblBacteriaiACD90871; ACD90871; Clim_1832.
KEGGicli:Clim_1832.
PATRICi21375883. VBIChlLim118737_1963.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA. Translation: ACD90871.1.
RefSeqiYP_001943850.1. NC_010803.1.

3D structure databases

ProteinModelPortaliB3EF09.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290315.Clim_1832.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD90871; ACD90871; Clim_1832.
KEGGicli:Clim_1832.
PATRICi21375883. VBIChlLim118737_1963.

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000153161.
OMAiCCYPARE.
OrthoDBiEOG6S267M.

Enzyme and pathway databases

BioCyciCLIM290315:GHUH-1879-MONOMER.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR000014. PAS.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF13426. PAS_9. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 245 / NBRC 103803Imported.

Entry informationi

Entry nameiB3EF09_CHLL2
AccessioniPrimary (citable) accession number: B3EF09
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: April 1, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.