Reviewed, UniProtKB/Swiss-Prot B3EEM6 (AROE_CHLL2)

Names and origin

Protein names

Recommended name:
    Shikimate dehydrogenase
    EC=1.1.1.25

Gene names

Name:	aroE
Ordered Locus Names:	Clim_1797

Organism

Chlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]

Taxonomic identifier

290315 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length	295 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	Shikimate + NADP+ = 3-dehydroshikimate + NADPH. HAMAP MF_00222
Pathway	Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7. HAMAP MF_00222
Sequence similarities	Belongs to the shikimate dehydrogenase family.

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Aromatic amino acid biosynthesis
Ligand	NADP
Molecular function	Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: HAMAP oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	NADP or NADPH binding Inferred from electronic annotation. Source: InterPro shikimate 5-dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 295	295	Shikimate dehydrogenase HAMAP MF_00222		PRO_1000100108
Regions
	Nucleotide binding	130 – 134	5	NADP By similarity
Sites
	Active site	70	1	Proton acceptor Potential

Sequences

	Sequence		Length	Mass (Da)
	B3EEM6-1 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: F2C9E15F88B48955	FASTA	295	32,356
	10 20 30 40 50 60 MKPSKQILGL IGRNVGYSWS PLIHNTACEL LGLPFIYTIF NIAEPQRLDD ALRGARALGI 70 80 90 100 110 120 AGFNVTIPYK QDVVPLLDHL AEEAASIRAV NTIVNIDGKL TGYNTDIEGF AAPLLSCRDS 130 140 150 160 170 180 IAGMPVSVFG SGGASLAAIE AFRRYFKPSI IYLFVRDLFK AIRMLESYDH KETISICLID 190 200 210 220 230 240 DLHAGKNSTR EHFGSSRVIV NATPIGTRGR TGDDVSCIVP LEKNLLHDSQ IVYDMVYNPL 250 260 270 280 290 RTPLLRAAEL AGAKTITGIE MLIGQAARSF TLWTGEIMPV EEVRTQLIRH IETGT

References

[1]

"Complete sequence of Chlorobium limicola DSM 245." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. , Overmann J., Bryant D.A., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP001097 Genomic DNA. Translation: ACD90836.1.
RefSeq	YP_001943815.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	6354626.
GenomeReviews	Gene locus Clim_1797 in contig CP001097_GR.
KEGG	cli:Clim_1797.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	VYTIFNI.
Family and domain databases
HAMAP	MF_00222. [Tree]
InterPro	IPR011342. Quinate/shikimate_5-DH. IPR013708. Shikimate_DH-bd_N. IPR006151. Shikm_DH/Glu-tRNA_Rdtase. [Graphical view]
Pfam	PF01488. Shikimate_DH. 1 hit. PF08501. Shikimate_dh_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR00507. aroE. 1 hit.
ProtoNet	Search...

Entry information

Entry name

AROE_CHLL2

Accession

Primary (citable) accession number: B3EEM6

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 24, 2009
Last sequence update:	July 22, 2008
Last modified:	November 3, 2009
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)